RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CFAP52Q8N1V2 620 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 CAMKK1Q8N5S9 505 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 CCDC148Q8NFR7 591 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 KLHDC4Q8TBB5 520 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 MAGEC3Q8TD91 643 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 BCAS4Q8TDM0 211 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 SCARB1Q8WTV0 552 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 ZKSCAN4Q969J2 545 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-213ENST00000556916 SARAFQ96BY9 339 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 C1GALT1C1Q96EU7 318 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 RPGRIP1Q96KN7 1286 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 AIFM3Q96NN9 605 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 WDR24Q96S15 920 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 PAIP2Q9BPZ3 127 aaKnown RBP4.12□□□□□ -1.75
FOXN3-213ENST00000556916 CRACR2AQ9BSW2 395 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 PAGR1Q9BTK6 254 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 CAPS2Q9BXY5 557 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 SLC29A3Q9BZD2 475 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 GOLPH3LQ9H4A5 285 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 ACTR5Q9H9F9 607 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-213ENST00000556916 CPNE5Q9HCH3 593 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 NMRK2Q9NPI5 230 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 KMT5AQ9NQR1 393 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 MAN1C1Q9NR34 630 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 HMG20BQ9P0W2 317 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 MYO1AQ9UBC5 1043 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 DDX20Q9UHI6 824 aaKnown RBP4.12□□□□□ -1.75
FOXN3-213ENST00000556916 GGA2Q9UJY4 613 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 MYO6Q9UM54 1294 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 ENTPD2Q9Y5L3 495 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 MYH7BA7E2Y1 1941 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 SOS1Q07889 1333 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-213ENST00000556916 SBNO1A3KN83 1393 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 SIGLEC1Q9BZZ2 1709 aa4.12□□□□□ -1.75
FOXN3-213ENST00000556916 MED1Q15648 1581 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SPATA31D1Q6ZQQ2 1576 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 RIMS1Q86UR5 1692 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 ANKRD18BA2A2Z9 1011 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TARSL2A2RTX5 802 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 CTAGE9A4FU28 777 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 GOLGA6CA6NDK9 693 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SRRM3A6NNA2 597 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 LRRIQ3A6PVS8 624 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 EIF3HO15372 352 aaKnown RBP eCLIP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 YY2O15391 372 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TSPAN6O43657 245 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 PFKFB2O60825 505 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 UBXN7O94888 489 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SUN1O94901 812 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 MAP4K4O95819 1239 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 HMOX1P09601 288 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 RHOXF2BP0C7M4 288 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 GOLGA6DP0CG33 693 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 HSPA6P17066 643 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 HTR1BP28222 390 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 FOLR3P41439 243 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 ME1P48163 572 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 FNTAP49354 379 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TOB1P50616 345 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 ZNF81P51508 661 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 ZNF135P52742 658 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 VSNL1P62760 191 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 MYL5Q02045 173 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SRSF4Q08170 494 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 GRIK3Q13003 919 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TRAF1Q13077 416 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TBX2Q13207 712 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 BOP1Q14137 746 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 KIF22Q14807 665 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 MLC1Q15049 377 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 RBBP5Q15291 538 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 LLGL1Q15334 1064 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 PLEKHO1Q53GL0 409 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 CEP85LQ5SZL2 805 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 THEMIS2Q5TEJ8 643 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 CCDC70Q6NSX1 233 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 PDILTQ8N807 584 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 PCSK9Q8NBP7 692 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TCP11Q8WWU5 503 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 RUBCNQ92622 972 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 ANKS1AQ92625 1134 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 MAP4K1Q92918 833 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 EVI5LQ96CN4 794 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 RSRC1Q96IZ7 334 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 MED15Q96RN5 788 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 CAMKK2Q96RR4 588 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 RHOXF2Q9BQY4 288 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 STK31Q9BXU1 1019 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 TMX4Q9H1E5 349 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 IL25Q9H293 177 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SMOC2Q9H3U7 446 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 PLEKHA4Q9H4M7 779 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 WDCPQ9H6R7 721 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 HOMER3Q9NSC5 361 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 KLC4Q9NSK0 619 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SIDT1Q9NXL6 827 aaKnown RBP4.11□□□□□ -1.75
FOXN3-213ENST00000556916 ETAA1Q9NY74 926 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 GOLGA6AQ9NYA3 693 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 CPA4Q9UI42 421 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 HPCAL4Q9UM19 191 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms