RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FCRL2Q96LA5 508 aaPredicted RBP18.21■□□□□ 0.51
SHMT2-225ENST00000556798 CHP1Q99653 195 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 SELENOOQ9BVL4 669 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 FOXQ1Q9C009 403 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 MFSD1Q9H3U5 465 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 DDIT4Q9NX09 232 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 CALCOCO1Q9P1Z2 691 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 TLR6Q9Y2C9 796 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 TCRBV5S1A1TA0A578 114 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 M0QYT0 321 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 RTN2O75298 545 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 MOCS2O96007 188 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-225ENST00000556798 GJA4P35212 333 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 PRKCQQ04759 706 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 GFPT1Q06210 699 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-225ENST00000556798 NME3Q13232 169 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 ZC3H12AQ5D1E8 599 aaKnown RBP18.2■□□□□ 0.5
SHMT2-225ENST00000556798 LY6G5CQ5SRR4 150 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 NAIF1Q69YI7 327 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-225ENST00000556798 CWF19L1Q69YN2 538 aaKnown RBP18.2■□□□□ 0.5
SHMT2-225ENST00000556798 PPP1R2P3Q6NXS1 205 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 RHBDF2Q6PJF5 856 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 TPGS1Q6ZTW0 290 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 PBXIP1Q96AQ6 731 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 OTUB2Q96DC9 234 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 SLC39A13Q96H72 371 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 TBCBQ99426 244 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 NPY6RQ99463 290 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 DCLK3Q9C098 648 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 STAP1Q9ULZ2 295 aa18.2■□□□□ 0.5
SHMT2-225ENST00000556798 STK25O00506 426 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 TRDMT1O14717 391 aaKnown RBP18.19■□□□□ 0.5
SHMT2-225ENST00000556798 KRT3P12035 628 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 STARD6P59095 220 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 RING1Q06587 406 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 NNTQ13423 1086 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 GAB4Q2WGN9 574 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 NUGGCQ68CJ6 796 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 TMEM25Q86YD3 366 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 SPC24Q8NBT2 197 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 RXFP2Q8WXD0 754 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 BHMTQ93088 406 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 ZNF653Q96CK0 615 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 SHDQ96IW2 340 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 MCEEQ96PE7 176 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
SHMT2-225ENST00000556798 DEF6Q9H4E7 631 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 C8orf33Q9H7E9 229 aaPredicted RBP18.19■□□□□ 0.5
SHMT2-225ENST00000556798 SPHK2Q9NRA0 654 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 NDRG2Q9UN36 371 aaKnown RBP18.19■□□□□ 0.5
SHMT2-225ENST00000556798 ZNF510Q9Y2H8 683 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 ZDBF2Q9HCK1 2354 aa18.19■□□□□ 0.5
SHMT2-225ENST00000556798 C2CD4BA6NLJ0 364 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ADH1CP00326 375 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 APOEP02649 317 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ADH5P11766 374 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ABCB4P21439 1286 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 CDC25BP30305 580 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 GBP1P32455 592 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 RFC1P35251 1148 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ATXN1P54253 815 aaKnown RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 RPL7AP62424 266 aaKnown RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ATP11AP98196 1134 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 NR1H3Q13133 447 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 EIF4EBP2Q13542 120 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 UBXN2BQ14CS0 331 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 PON2Q15165 354 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 CDO1Q16878 200 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 C15orf59Q2T9L4 293 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ASTE1Q2TB18 679 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ANO4Q32M45 955 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 SLC25A52Q3SY17 297 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 CCDC122Q5T0U0 273 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ALKBH5Q6P6C2 394 aaKnown RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ZNF852Q6ZMS4 543 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 RALGPS2Q86X27 583 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 UNC45BQ8IWX7 931 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 FAM3CQ92520 227 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 P2RY11Q96G91 374 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 VCPIP1Q96JH7 1222 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 ISCUQ9H1K1 167 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 NHEJ1Q9H9Q4 299 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 PIGVQ9NUD9 493 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 MYO1AQ9UBC5 1043 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 CNOT8Q9UFF9 292 aaKnown RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 XPO7Q9UIA9 1087 aaKnown RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 NENFQ9UMX5 172 aa18.18■□□□□ 0.5
SHMT2-225ENST00000556798 MTF2Q9Y483 593 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-225ENST00000556798 GOLGA6L7A0A1B0GV03 622 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 SSU72P8A0A1W2PR75 194 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 KANSL1LA0AUZ9 987 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 SIGLEC16A6NMB1 481 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 NEDD8-MDP1E9PL57 170 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 AKR1B10O60218 316 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 GLULP15104 373 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 PDGFRAP16234 1089 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 GPD1P21695 349 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 TARSP26639 723 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms