RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FOXP3Q9BZS1 431 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 VPS37BQ9H9H4 285 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 WDR6Q9NNW5 1121 aaKnown RBP18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 ARHGEF4Q9NR80 690 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 NT5C1B-RDH14C9J2C7 533 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 F5H423 210 aaPredicted RBP18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 TRIM66O15016 1216 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 MDH1P40925 334 aaKnown RBP18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 PGFP49763 221 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 RELL1Q8IUW5 271 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 MRRFQ96E11 262 aaKnown RBP18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 PPP1R12CQ9BZL4 782 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 KANSL3Q9P2N6 904 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 MFSD11O43934 449 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 CAPN15O75808 1086 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ZFXP17010 805 aaPredicted RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ADRA1BP35368 520 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 MAPRE1Q15691 268 aaKnown RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 BBS9Q3SYG4 887 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 EMC10Q5UCC4 262 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ARFGAP2Q8N6H7 521 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 LGMNQ99538 433 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ROPN1BQ9BZX4 212 aaPredicted RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ROPN1Q9HAT0 212 aaPredicted RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 LRFN2Q9ULH4 789 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 BCLAF3A2AJT9 711 aaKnown RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ZNF487B1APH4 448 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 EIF3HO15372 352 aaKnown RBP eCLIP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 PIAS1O75925 651 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 GPR15P49685 360 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 SLC5A3P53794 718 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ARPP19P56211 112 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ARL4CP56559 192 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 FOXR1Q6PIV2 292 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 TP53INP2Q8IXH6 220 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 MYCBPQ99417 103 aaPredicted RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 PAK6Q9NQU5 681 aaPredicted RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 SLC12A6Q9UHW9 1150 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 NUDT5Q9UKK9 219 aa18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 LAMA2P24043 3122 aaKnown RBP18.96■□□□□ 0.63
SDR39U1-220ENST00000556548 ARHGEF37A1IGU5 675 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 EEF2KO00418 725 aaKnown RBP18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 ALOX15BO15296 676 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 AVILO75366 819 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CCL5P13501 91 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 FAM171A1Q5VUB5 890 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 PM20D1Q6GTS8 502 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 C4orf50Q6ZRC1 276 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 DEFB128Q7Z7B8 93 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 TAC4Q86UU9 113 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CYP4X1Q8N118 509 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 TET1Q8NFU7 2136 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CASD1Q96PB1 797 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 COLEC11Q9BWP8 271 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 SAGE1Q9NXZ1 904 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 H3BRJ5 948 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CLGNO14967 610 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 AGTP01019 485 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 LSP1P33241 339 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 DDR2Q16832 855 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 SLC45A4Q5BKX6 768 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 VARS2Q5ST30 1063 aaKnown RBP18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CEP128Q6ZU80 1094 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CDKL3Q8IVW4 592 aaPredicted RBP18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 SEPT8Q92599 483 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 RNF34Q969K3 372 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 WDR83Q9BRX9 315 aaKnown RBP18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 CEP41Q9BYV8 373 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 GPR62Q9BZJ7 368 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 TKTL2Q9H0I9 626 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 PPANQ9NQ55 473 aaKnown RBP18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 PAK5Q9P286 719 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 FBXW11Q9UKB1 542 aa18.95■□□□□ 0.62
SDR39U1-220ENST00000556548 POC1B-GALNT4F8VUJ3 575 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 CREB1P16220 341 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 PAX3P23760 479 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 SSTR1P30872 391 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 SEC24CP53992 1094 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 RFX8Q6ZV50 586 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 SRLQ86TD4 932 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 FBXO36Q8NEA4 188 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 GPR152Q8TDT2 470 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 PYROXD1Q8WU10 500 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 SERPINB12Q96P63 405 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 WDCPQ9H6R7 721 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 A0A087WUV0 522 aaPredicted RBP18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 EXOC1LA0A1B0GW35 172 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 NDC80O14777 642 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 TRAPPC3O43617 180 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 NR2C2P49116 596 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 CROCCP2Q86T23 111 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 EXOC3L1Q86VI1 746 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 PSTKQ8IV42 348 aaKnown RBP18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 ZCWPW1Q9H0M4 648 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 ETNK1Q9HBU6 452 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 PCDH10Q9P2E7 1040 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 ADAM28Q9UKQ2 775 aa18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 MRPL42Q9Y6G3 142 aaKnown RBP18.94■□□□□ 0.62
SDR39U1-220ENST00000556548 CFAP69A5D8W1 941 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 OAZ2O95190 189 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms