RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ZNF574Q6ZN55 896 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 NET1Q7Z628 596 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 CCDC25Q86WR0 208 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 MIB1Q86YT6 1006 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 NOSTRINQ8IVI9 506 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SLC22A9Q8IVM8 553 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 MCATQ8IVS2 390 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 CCDC28AQ8IWP9 274 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 TCEAL8Q8IYN2 117 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SMYD4Q8IYR2 804 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 SLC38A6Q8IZM9 456 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 LINC00518Q8N0U6 118 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 CARFQ8N187 725 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ARMC10Q8N2F6 343 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 AFAP1L2Q8N4X5 818 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 NKAPQ8N5F7 415 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 DPP10Q8N608 796 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ARFGAP2Q8N6H7 521 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PLD5Q8N7P1 536 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 NIPA2Q8N8Q9 360 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 IGSF22Q8N9C0 903 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 KBTBD3Q8NAB2 608 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 NOA1Q8NC60 698 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 TRPV1Q8NER1 839 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 LHFPL5Q8TAF8 219 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SPPL3Q8TCT6 385 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 XAGE3Q8WTP9 111 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PYROXD1Q8WU10 500 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SCFD1Q8WVM8 642 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 RFKQ969G6 155 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 RAD51AP1Q96B01 352 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SLC22A18Q96BI1 424 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ACSF2Q96CM8 615 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 SGF29Q96ES7 293 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PIGSQ96S52 555 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 TESK2Q96S53 571 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 OLFM1Q99784 485 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SSBP4Q9BWG4 385 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 ACSS3Q9H6R3 686 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PLGRKTQ9HBL7 147 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 DDX28Q9NUL7 540 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 HAUS2Q9NVX0 235 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 POLR3BQ9NW08 1133 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 STK32BQ9NY57 414 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 HSPBP1Q9NZL4 362 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 OR6C2Q9NZP2 312 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 DLGAP2Q9P1A6 1054 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 CYTH4Q9UIA0 394 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 VPS51Q9UID3 782 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 GMEB2Q9UKD1 530 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PSME2Q9UL46 239 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PCDHA12Q9UN75 941 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ERGIC3Q9Y282 383 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 DERAQ9Y315 318 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ZNF175Q9Y473 711 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 GRIN2DO15399 1336 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 WDR19Q8NEZ3 1342 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 IQGAP2Q13576 1575 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 A0A1W2PQ67 120 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 LOC390937A0A1W2PQ73 354 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 OR5K3A6NET4 321 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 SLC22A31A6NKX4 558 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 FAM155AB1AL88 458 aaPredicted RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 CTNND1O60716 968 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 TMEM127O75204 238 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 CRTAMO95727 393 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 OPN1LWP04000 364 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 DNTTP04053 509 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 IFNA16P05015 189 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 URODP06132 367 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 RB1P06400 928 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 SLC3A2P08195 630 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 NFICP08651 508 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 HSMCR30P0CW71 290 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 NPR1P16066 1061 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 GJA1P17302 382 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 HOXB8P17481 243 aaPredicted RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 ITGB6P18564 788 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 KELP23276 732 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 MAPK3P27361 379 aaPredicted RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 SHMT1P34896 483 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 HTR2BP41595 481 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 ME1P48163 572 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 PTDSS1P48651 473 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 SLC26A5P58743 744 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 TAP1Q03518 808 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 COASYQ13057 564 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 TKFCQ3LXA3 575 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 GTF2IRD2BQ6EKJ0 949 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 SPOPLQ6IQ16 392 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 ZNF425Q6IV72 752 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 NUP54Q7Z3B4 507 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 MIER3Q7Z3K6 550 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 SLFN11Q7Z7L1 901 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 TTC6Q86TZ1 520 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 GTF2IRD2Q86UP8 949 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 DENND6AQ8IWF6 608 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 TRIM59Q8IWR1 403 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms