RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ELAC1Q9H777 363 aaKnown RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 VPS45Q9NRW7 570 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 TCP11L1Q9NUJ3 509 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 POLLQ9UGP5 575 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ZNF112Q9UJU3 913 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 LTBP1Q14766 1721 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 MYO3BQ8WXR4 1341 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 MYH6P13533 1939 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 CLGNO14967 610 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 SPTLC2O15270 562 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 NARSO43776 548 aaKnown RBP5.59□□□□□ -1.51
SRP54-211ENST00000556445 KINO60870 393 aaKnown RBP5.59□□□□□ -1.51
SRP54-211ENST00000556445 TBX18O95935 607 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 SLPIP03973 132 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 U2AF2P26368 475 aaKnown RBP eCLIP5.59□□□□□ -1.51
SRP54-211ENST00000556445 GDF5P43026 501 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 BTDP43251 543 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 FXR1P51114 621 aaKnown RBP eCLIP5.59□□□□□ -1.51
SRP54-211ENST00000556445 ADKP55263 362 aaKnown RBP5.59□□□□□ -1.51
SRP54-211ENST00000556445 ARL4CP56559 192 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 SCAND1P57086 179 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 SNX16P57768 344 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 KIF23Q02241 960 aaPredicted RBP5.59□□□□□ -1.51
SRP54-211ENST00000556445 CRHR2Q13324 411 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 TAF12Q16514 161 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 FAM214AQ32MH5 1076 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 RILPL1Q5EBL4 403 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 DNAJC21Q5F1R6 531 aaKnown RBP5.59□□□□□ -1.51
SRP54-211ENST00000556445 CT83Q5H943 113 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 ADALQ6DHV7 355 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 MFSD5Q6N075 450 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 TMCO3Q6UWJ1 677 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 DSTYKQ6XUX3 929 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 RFX8Q6ZV50 586 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 RPAINQ86UA6 219 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 GAS2L3Q86XJ1 694 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 C2CD5Q86YS7 1000 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 TEX11Q8IYF3 940 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 MDGA1Q8NFP4 955 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 OR14C36Q8NHC7 312 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 ZNF384Q8TF68 577 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 LMBR1Q8WVP7 490 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 TRAPPC12Q8WVT3 735 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 SH3KBP1Q96B97 665 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 C1GALT1C1Q96EU7 318 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 VMP1Q96GC9 406 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 PLEKHG4BQ96PX9 1271 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 FAM167BQ9BTA0 163 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 B3GNT5Q9BYG0 378 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 TNMDQ9H2S6 317 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 KCTD10Q9H3F6 313 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 KAT14Q9H8E8 782 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 WASH6PQ9NQA3 447 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 NFKBIL1Q9UBC1 381 aaPredicted RBP5.59□□□□□ -1.51
SRP54-211ENST00000556445 SRRDQ9UH36 339 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 CDY2AQ9Y6F7 541 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 NAV1Q8NEY1 1877 aa5.59□□□□□ -1.51
SRP54-211ENST00000556445 TISP43B9A030 160 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 B9A039 149 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 CYR61O00622 381 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 NRP1O14786 923 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 ADAMTS3O15072 1205 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 B3GALT2O43825 422 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 PPP6R2O75170 966 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TMEM127O75204 238 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 UBXN7O94888 489 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MMP1P03956 469 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 HLA-DOAP06340 250 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 LPLP06858 475 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TSPY3P0CV98 308 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TSPY8P0CW00 308 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 IDEP14735 1019 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 CALML3P27482 149 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 CASRP41180 1078 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 ME1P48163 572 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MAN2A2P49641 1150 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 CLNS1AP54105 237 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 ATXN1P54253 815 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 CACNB3P54284 484 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 NRG3P56975 720 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 PLIN5Q00G26 463 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 GUCY1B3Q02153 619 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 SLC39A14Q15043 492 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 PLCB4Q15147 1175 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 ZRSR1Q15695 479 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 CLUL1Q15846 466 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MEA1Q16626 185 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 FSCN1Q16658 493 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 LSM12Q3MHD2 195 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 FAM209BQ5JX69 171 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 STRIP1Q5VSL9 837 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 FNDC7Q5VTL7 733 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 GALNT17Q6IS24 598 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 PGBD2Q6P3X8 592 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 SASS6Q6UVJ0 657 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 DENND1CQ8IV53 801 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 GLB1L2Q8IW92 636 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MIER2Q8N344 545 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 ESX1Q8N693 406 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 ARL6IP6Q8N6S5 226 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms