RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 C1orf127Q8N9H9 656 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PPTC7Q8NI37 304 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 HERVK_113Q902F9 699 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 MAGOHBQ96A72 148 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 EMID1Q96A84 441 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 GIMAP5Q96F15 307 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 VCPIP1Q96JH7 1222 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 NIF3L1Q9GZT8 377 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 RAB17Q9H0T7 212 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SNX25Q9H3E2 840 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TMBIM4Q9HC24 238 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ADAM22Q9P0K1 906 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CYTH4Q9UIA0 394 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TNFSF13BQ9Y275 285 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SNX24Q9Y343 169 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 A0A087WZ62 844 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ASB14A6NK59 587 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 DCDC2CA8MYV0 355 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 GOLGA8RI6L899 631 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SNX4O95219 450 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 IL32P24001 234 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 IVDP26440 423 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TKTP29401 623 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LRPAP1P30533 357 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CDH5P33151 784 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 C1QBPQ07021 282 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 DHX9Q08211 1270 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LAPTM5Q13571 262 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 FAM187BQ17R55 369 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 DUOXA2Q1HG44 320 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM95Q3KNT9 176 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC14Q49A88 953 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 MAP1SQ66K74 1059 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LRIG3Q6UXM1 1119 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TRIM72Q6ZMU5 477 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC81Q6ZN84 652 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 BZW1Q7L1Q6 419 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LPCAT2Q7L5N7 544 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ZER1Q7Z7L7 766 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 GPRC5AQ8NFJ5 357 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 AFG1LQ8WV93 481 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ATG4AQ8WYN0 398 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 EFHD2Q96C19 240 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 HAUS1Q96CS2 278 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ATP6V1G3Q96LB4 118 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PPP1R16BQ96T49 567 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PTPN18Q99952 460 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 FDXACB1Q9BRP7 624 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SDCBP2Q9H190 292 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PDZD7Q9H5P4 517 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 HMGXB4Q9UGU5 601 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 POLIQ9UNA4 740 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 FAF1Q9UNN5 650 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ARHGAP10A1A4S6 786 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 F8W810 466 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SULT1B1O43704 296 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 VTNP04004 478 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 HEXBP07686 556 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 HOXD8P13378 290 aaPredicted RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SCNN1AP37088 669 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SLC1A1P43005 524 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 FNTAP49354 379 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SULT1E1P49888 294 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 IRAK1P51617 712 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TFAMQ00059 246 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SGSM1Q2NKQ1 1148 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ODF2Q5BJF6 829 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SCARA5Q6ZMJ2 495 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 YME1L1Q96TA2 773 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 NDNQ99608 321 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 APOL5Q9BWW9 433 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 BCO2Q9BYV7 579 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CXCL16Q9H2A7 254 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 WDR6Q9NNW5 1121 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 AAASQ9NRG9 546 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ENAMQ9NRM1 1142 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 MORF4L1Q9UBU8 362 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 PTPN22Q9Y2R2 807 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 NEU2Q9Y3R4 380 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM191CA6NGB0 347 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 HNRNPCL2B2RXH8 293 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 IGF2BP3O00425 579 aaKnown RBP eCLIP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 HDAC3O15379 428 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TLR3O15455 904 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 HNRNPCL1O60812 293 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CBFA2T3O75081 653 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SIN3BO75182 1162 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SHBGP04278 402 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM191BP0C7N4 346 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ARF4P18085 180 aaPredicted RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 RAP1GAPP47736 663 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CSNK2BP67870 215 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 LAMC2Q13753 1193 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 BYSLQ13895 437 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF699Q32M78 642 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TXNRD3NBQ6F5E7 133 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 KDM7AQ6ZMT4 941 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 OR8H1Q8NGG4 311 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms