RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 EMC1Q8N766 993 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 ATP6V0D2Q8N8Y2 350 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 JOSD2Q8TAC2 188 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 RFFLQ8WZ73 363 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 IRF7Q92985 503 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 PGAP3Q96FM1 320 aaPredicted RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 PPP1R9BQ96SB3 815 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 KXD1Q9BQD3 176 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 TSGA10Q9BZW7 698 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 SMG9Q9H0W8 520 aaKnown RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 WDCPQ9H6R7 721 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 BRD9Q9H8M2 597 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 KCNK12Q9HB15 430 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 GKN1Q9NS71 199 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 SFMBT1Q9UHJ3 866 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 ANAPC7Q9UJX3 599 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 NUMBLQ9Y6R0 609 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 HELZP42694 1942 aaKnown RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 SYNJ2BP-COX16A0A087WUM0 186 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 A0A0A6YYK5 440 aaPredicted RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 NRG2O14511 850 aaPredicted RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 CHADO15335 359 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 ATMINO43313 823 aaPredicted RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 MSI1O43347 362 aaKnown RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 IGLV3-25P01717 112 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 HMBSP08397 361 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 CCDC175P0C221 793 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 IRF1P10914 325 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 FCARP24071 287 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 GDI1P31150 447 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 CHKAP35790 457 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 NAP1L1P55209 391 aaKnown RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 RPL7AP62424 266 aaKnown RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 ATP11AP98196 1134 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 AMPD2Q01433 879 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 NR1H3Q13133 447 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 TDGQ13569 410 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 TCEAL1Q15170 157 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 ZNF77Q15935 545 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 CDO1Q16878 200 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 CCDC14Q49A88 953 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 PPP1R15BQ5SWA1 713 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 VITQ6UXI7 678 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 DNAAF5Q86Y56 855 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 GJD3Q8N144 294 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 SLC44A3Q8N4M1 653 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 SLC35G2Q8TBE7 412 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 ZNF564Q8TBZ8 553 aaPredicted RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 ADAM32Q8TC27 787 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 FAM172AQ8WUF8 416 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 OSCP1Q8WVF1 389 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 FGF14Q92915 247 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 ATP2A3Q93084 1043 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 NT5C3BQ969T7 300 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 EXOC4Q96A65 974 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 AZIN2Q96A70 460 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 ZFRQ96KR1 1074 aaKnown RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 BTN2A3PQ96KV6 586 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 CFAP57Q96MR6 1250 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 TBCBQ99426 244 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 PACSIN1Q9BY11 444 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 DUS2Q9NX74 493 aaKnown RBP7.94□□□□□ -1.14
TDP1-214ENST00000556063 COX16Q9P0S2 106 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 SORCS3Q9UPU3 1222 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 CCL26Q9Y258 94 aa7.94□□□□□ -1.14
TDP1-214ENST00000556063 TTC28Q96AY4 2481 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 TYW5A2RUC4 315 aaKnown RBP7.93□□□□□ -1.14
TDP1-214ENST00000556063 BTNL10A8MVZ5 291 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 PJA2O43164 708 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 KRT86O43790 486 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 PRPSAP2O60256 369 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 ACSL4O60488 711 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 MTA2O94776 668 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 ENDOD1O94919 500 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 GJB6O95452 261 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 NFATC1O95644 943 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 ADH1CP00326 375 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 IGLV3-27P01718 113 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CYBBP04839 570 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 SRFP11831 508 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CORO1AP31146 461 aaKnown RBP7.93□□□□□ -1.14
TDP1-214ENST00000556063 ARHGAP25P42331 645 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CXCR3P49682 368 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 AIF1P55008 147 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CCZ1BP86790 482 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CCZ1P86791 482 aaPredicted RBP7.93□□□□□ -1.14
TDP1-214ENST00000556063 FCHO2Q0JRZ9 810 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 GRM2Q14416 872 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 HADHQ16836 314 aaKnown RBP7.93□□□□□ -1.14
TDP1-214ENST00000556063 ZC3H12AQ5D1E8 599 aaKnown RBP7.93□□□□□ -1.14
TDP1-214ENST00000556063 ADGRF1Q5T601 910 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 SCYL2Q6P3W7 929 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 DENND1CQ8IV53 801 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 UBALD2Q8IYN6 164 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CPA6Q8N4T0 437 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 NIPA2Q8N8Q9 360 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 ACRBPQ8NEB7 543 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 CSGALNACT1Q8TDX6 532 aa7.93□□□□□ -1.14
TDP1-214ENST00000556063 ADAMTS19Q8TE59 1207 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms