RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ANKRD40Q6AI12 368 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 ANKS1BQ7Z6G8 1248 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 UBR7Q8N806 425 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 SMARCE1Q969G3 411 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 MRGPRX1Q96LB2 322 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 HESX1Q9UBX0 185 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 CYP8B1Q9UNU6 501 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 STON1Q9Y6Q2 735 aa20.66■□□□□ 0.9
PRKCH-219ENST00000555906 SLC12A8A0AV02 714 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 TRIM49BA6NDI0 452 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 TULP2O00295 520 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 CYBBP04839 570 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 CFIP05156 583 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 MAPK8P45983 427 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 ADIGQ0VDE8 80 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 ENPP2Q13822 863 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 STARD3Q14849 445 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 EIF4HQ15056 248 aaKnown RBP20.65■□□□□ 0.9
PRKCH-219ENST00000555906 E2F5Q15329 346 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 GEN1Q17RS7 908 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 UAP1L1Q3KQV9 507 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 DENND1CQ8IV53 801 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 UCMAQ8WVF2 138 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 PIWIL1Q96J94 861 aaKnown RBP20.65■□□□□ 0.9
PRKCH-219ENST00000555906 LRRC4Q9HBW1 653 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 CAPN10Q9HC96 672 aa20.65■□□□□ 0.9
PRKCH-219ENST00000555906 THAP10Q9P2Z0 257 aaPredicted RBP20.65■□□□□ 0.9
PRKCH-219ENST00000555906 HOOK1Q9UJC3 728 aaKnown RBP20.65■□□□□ 0.9
PRKCH-219ENST00000555906 ZFHX4Q86UP3 3567 aa20.64■□□□□ 0.9
PRKCH-219ENST00000555906 PSMA7O14818 248 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 KRT37O76014 449 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 SERPINF2P08697 491 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 SETSIPP0DME0 302 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 VDRP11473 427 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 CD19P15391 556 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 TRIP4Q15650 581 aaPredicted RBP20.64■□□□□ 0.89
PRKCH-219ENST00000555906 KIAA1324Q6UXG2 1013 aaKnown RBP20.64■□□□□ 0.89
PRKCH-219ENST00000555906 SLC41A1Q8IVJ1 513 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 HSPA12BQ96MM6 686 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 TIGD1Q96MW7 591 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 IPO9Q96P70 1041 aaKnown RBP20.64■□□□□ 0.89
PRKCH-219ENST00000555906 SLC2A11Q9BYW1 496 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 SLC6A17Q9H1V8 727 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 METTL14Q9HCE5 456 aaKnown RBP20.64■□□□□ 0.89
PRKCH-219ENST00000555906 SLC6A14Q9UN76 642 aa20.64■□□□□ 0.89
PRKCH-219ENST00000555906 HBS1LQ9Y450 684 aaKnown RBP20.64■□□□□ 0.89
PRKCH-219ENST00000555906 PCNX2A6NKB5 2137 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 WASH3PC4AMC7 463 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 O00370 1275 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 IL12RB1P42701 662 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 ZNF445P59923 1031 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 STIM1Q13586 685 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 FUT11Q495W5 492 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 METTL3Q86U44 580 aaKnown RBP20.63■□□□□ 0.89
PRKCH-219ENST00000555906 SIX6OS1Q8N1H7 587 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 SCML4Q8N228 414 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 DEFB119Q8N690 84 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 TRIML1Q8N9V2 468 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 KCTD13Q8WZ19 329 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 ERCC4Q92889 916 aaPredicted RBP20.63■□□□□ 0.89
PRKCH-219ENST00000555906 ERLEC1Q96DZ1 483 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 CEP63Q96MT8 703 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 CD93Q9NPY3 652 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 KIAA1257Q9ULG3 409 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 ASPMQ8IZT6 3477 aa20.63■□□□□ 0.89
PRKCH-219ENST00000555906 UPK3BL1B0FP48 263 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 UPK3BL2E5RIL1 263 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 PMM2O15305 246 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 LATS1O95835 1130 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 PPP1R2P41236 205 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 FMO5P49326 533 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 HARS2P49590 506 aaKnown RBP20.62■□□□□ 0.89
PRKCH-219ENST00000555906 GFPT1Q06210 699 aaPredicted RBP20.62■□□□□ 0.89
PRKCH-219ENST00000555906 PKDCCQ504Y2 493 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 FMNL3Q8IVF7 1028 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 RBBP8NLQ8NC74 664 aaPredicted RBP20.62■□□□□ 0.89
PRKCH-219ENST00000555906 DEFB124Q8NES8 71 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 DDI1Q8WTU0 396 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 RNF139Q8WU17 664 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 FOXJ1Q92949 421 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 ZNF419Q96HQ0 510 aaPredicted RBP20.62■□□□□ 0.89
PRKCH-219ENST00000555906 SLC32A1Q9H598 525 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 CNGB3Q9NQW8 809 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 USP36Q9P275 1121 aaKnown RBP20.62■□□□□ 0.89
PRKCH-219ENST00000555906 STOML2Q9UJZ1 356 aa20.62■□□□□ 0.89
PRKCH-219ENST00000555906 NDUFS2O75306 463 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 PAEPP09466 180 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 HOXD9P28356 352 aaPredicted RBP20.61■□□□□ 0.89
PRKCH-219ENST00000555906 CD6P30203 668 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 ATXN3P54252 364 aaPredicted RBP20.61■□□□□ 0.89
PRKCH-219ENST00000555906 NUCB2P80303 420 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 BECN1Q14457 450 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 ZNF234Q14588 700 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 NDRG1Q92597 394 aaKnown RBP20.61■□□□□ 0.89
PRKCH-219ENST00000555906 DHTKD1Q96HY7 919 aaPredicted RBP20.61■□□□□ 0.89
PRKCH-219ENST00000555906 NT5C1BQ96P26 610 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 PRDM16Q9HAZ2 1276 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 ABCC13Q9NSE7 274 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 SUSD2Q9UGT4 822 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 CLEC4EQ9ULY5 219 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms