RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ADAM32Q8TC27 787 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 AZIN2Q96A70 460 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 BTBD6Q96KE9 485 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 MYADMQ96S97 322 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 GKN1Q9NS71 199 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 PIGVQ9NUD9 493 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 EPS15L1Q9UBC2 864 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 CPQQ9Y646 472 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 E2F8A0AVK6 867 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 KCNU1A8MYU2 1149 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 LRCH4O75427 683 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 MOCS3O95396 460 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 LATS1O95835 1130 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 IGLV3-27P01718 113 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 APOEP02649 317 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 CDO1Q16878 200 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ARL13BQ3SXY8 428 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 FAM78AQ5JUQ0 283 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 LRRC38Q5VT99 294 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 OTUD1Q5VV17 481 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 PTCRAQ6ISU1 281 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 POTEHQ6S545 545 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 HTR3DQ70Z44 454 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 DAAM2Q86T65 1068 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 PSTKQ8IV42 348 aaKnown RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ATP6V0D2Q8N8Y2 350 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 LRRC57Q8N9N7 239 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 TRIM58Q8NG06 486 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 USP13Q92995 863 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 FCRL2Q96LA5 508 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ALS2CR12Q96Q35 445 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ZFP14Q9HCL3 533 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 ARHGEF38Q9NXL2 777 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 NR2E1Q9Y466 385 aa12.96□□□□□ -0.33
SHMT2-221ENST00000555773 PATJQ8NI35 1801 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 SYNJ2BP-COX16A0A087WUM0 186 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 TMEM110-MUSTN1A8MSY1 372 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 LEFTY2O00292 366 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
SHMT2-221ENST00000555773 PRPSAP2O60256 369 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 KIF5CO60282 957 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 PALMO75781 387 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 STC2O76061 302 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 COMTP21964 271 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 MIPP30301 263 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 ADRA1BP35368 520 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 SLC11A2P49281 568 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 ZXDBP98169 803 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 SCYL2Q6P3W7 929 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 NXPE3Q969Y0 559 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 NTAN1Q96AB6 310 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 C1orf74Q96LT6 269 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 LSM7Q9UK45 103 aaKnown RBP12.95□□□□□ -0.34
SHMT2-221ENST00000555773 USP18Q9UMW8 372 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 GREB1Q4ZG55 1949 aa12.95□□□□□ -0.34
SHMT2-221ENST00000555773 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 SPOPO43791 374 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 ECI2O75521 394 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 PRAMEF12O95522 483 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 HMBSP08397 361 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 KRT7P08729 469 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 KCNQ1P51787 676 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 ATXN1P54253 815 aaKnown RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 SCAPQ12770 1279 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 ERMARDQ5T6L9 678 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 RHOT1Q8IXI2 618 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 TDRD5Q8NAT2 981 aaKnown RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 ELSPBP1Q96BH3 223 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 DDX50Q9BQ39 737 aaKnown RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 OSBPL2Q9H1P3 480 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 THG1LQ9NWX6 298 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms