RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 PRAMEF2O60811 474 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 LARGE1O95461 756 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 POLBP06746 335 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 TMIGD3P0DMS9 266 aaPredicted RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 ZNF37AP17032 561 aaPredicted RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 MMP8P22894 467 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 MCM7P33993 719 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 CCT8P50990 548 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 PAPOLAP51003 745 aaKnown RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 TXNL4AP83876 142 aaKnown RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 SMAD1Q15797 465 aaKnown RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 TBC1D25Q3MII6 688 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 PCID2Q5JVF3 399 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 ZNF569Q5MCW4 686 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 HECTD2Q5U5R9 776 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 CCDC70Q6NSX1 233 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 CRIP3Q6Q6R5 217 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 MTHFD1LQ6UB35 978 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 KIRREL2Q6UWL6 708 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 ULK2Q8IYT8 1036 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 NGDNQ8NEJ9 315 aaKnown RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 ASB12Q8WXK4 309 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 TBATAQ96M53 351 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 COG8Q96MW5 612 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 NAP1L4Q99733 375 aaKnown RBP5.3□□□□□ -1.56
KTN1-223ENST00000555573 ABHD16BQ9H3Z7 469 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 RAB21Q9UL25 225 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 VPS4AQ9UN37 437 aa5.3□□□□□ -1.56
KTN1-223ENST00000555573 FAM90A20PA6NIJ5 464 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 TISP43B9A030 160 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 MGST3O14880 152 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 MBPP02686 304 aaPredicted RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 FAM163BP0C2L3 166 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 MYCLP12524 364 aaPredicted RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 KRT4P19013 534 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 DRD4P21917 467 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 IGHMBP2P38935 993 aaKnown RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 CDK7P50613 346 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 GPC5P78333 572 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 RAE1P78406 368 aaKnown RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 SIM1P81133 766 aaPredicted RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 RNASELQ05823 741 aaKnown RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 PDCLQ13371 301 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 FAM187BQ17R55 369 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 DGAT2L7PQ6IED9 249 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 ACSM6Q6P461 480 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 SFTPA1Q8IWL2 248 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 FAM71DQ8N9W8 422 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 NEU4Q8WWR8 484 aaPredicted RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 HERVK_113Q902F9 699 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 FAR2Q96K12 515 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 MACROD1Q9BQ69 325 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 CHODLQ9H9P2 273 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 USP29Q9HBJ7 922 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 PDP2Q9P2J9 529 aa5.29□□□□□ -1.56
KTN1-223ENST00000555573 TRPC5Q9UL62 973 aaPredicted RBP5.29□□□□□ -1.56
KTN1-223ENST00000555573 EYA2O00167 538 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 NKX2-8O15522 239 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 WDHD1O75717 1129 aaPredicted RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 TNFRSF1AP19438 455 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 GALNSP34059 522 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 RPL15P61313 204 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 CCDC15Q0P6D6 951 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 EFR3AQ14156 821 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 AARS2Q5JTZ9 985 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 NAPRTQ6XQN6 538 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 ANKS1BQ7Z6G8 1248 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 TMEM57Q8N5G2 664 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 IL17REQ8NFR9 667 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 CEP70Q8NHQ1 597 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 EDC3Q96F86 508 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 MMS19Q96T76 1030 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 CINPQ9BW66 212 aaPredicted RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 MYRFQ9Y2G1 1151 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 ZNF213O14771 459 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 ORC4O43929 436 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 HEXIM1O94992 359 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 RBM5P52756 815 aaKnown RBP eCLIP5.28□□□□□ -1.56
KTN1-223ENST00000555573 COPB1P53618 953 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 CYP4F2P78329 520 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 ABHD18Q0P651 414 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 DENND2CQ68D51 928 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 SYNE3Q6ZMZ3 975 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 RASAL3Q86YV0 1011 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 Q8N1X5 172 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 C12orf76Q8N812 135 aaPredicted RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 PNISRQ8TF01 805 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 TRMT61AQ96FX7 289 aaKnown RBP5.28□□□□□ -1.56
KTN1-223ENST00000555573 SNX18Q96RF0 628 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 CIPCQ9C0C6 399 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 CDCP1Q9H5V8 836 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 RCE1Q9Y256 329 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 CRYL1Q9Y2S2 319 aa5.28□□□□□ -1.56
KTN1-223ENST00000555573 AGAP5A6NIR3 686 aa5.27□□□□□ -1.57
KTN1-223ENST00000555573 PRRG2O14669 202 aa5.27□□□□□ -1.57
KTN1-223ENST00000555573 APEHP13798 732 aaKnown RBP5.27□□□□□ -1.57
KTN1-223ENST00000555573 CD53P19397 219 aa5.27□□□□□ -1.57
KTN1-223ENST00000555573 BUD31P41223 144 aaPredicted RBP5.27□□□□□ -1.57
KTN1-223ENST00000555573 JAK3P52333 1124 aa5.27□□□□□ -1.57
KTN1-223ENST00000555573 RBM6P78332 1123 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms