RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 XPO6Q96QU8 1125 aaKnown RBP21.39■■□□□ 1.01
VTI1B-205ENST00000555543 LIMA1Q9UHB6 759 aaKnown RBP21.39■■□□□ 1.01
VTI1B-205ENST00000555543 NAALADL1Q9UQQ1 740 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 EML5Q05BV3 1969 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 F8VZ95 297 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 SGK1O00141 431 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 CISD3P0C7P0 127 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 HARS2P49590 506 aaKnown RBP21.38■■□□□ 1.01
VTI1B-205ENST00000555543 DGKGP49619 791 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 TAF5Q15542 800 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 ANO6Q4KMQ2 910 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 SYPL2Q5VXT5 272 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 TMEM92Q6UXU6 159 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 APTXQ7Z2E3 356 aaKnown RBP21.38■■□□□ 1.01
VTI1B-205ENST00000555543 DCLK2Q8N568 766 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 CAMKK1Q8N5S9 505 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 TXNDC5Q8NBS9 432 aaKnown RBP21.38■■□□□ 1.01
VTI1B-205ENST00000555543 LHX5Q9H2C1 402 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 FAM207AQ9NSI2 230 aaPredicted RBP21.38■■□□□ 1.01
VTI1B-205ENST00000555543 STOML2Q9UJZ1 356 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 FBXO10Q9UK96 956 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 SIK3Q9Y2K2 1263 aa21.38■■□□□ 1.01
VTI1B-205ENST00000555543 PRRT4C9JH25 899 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 GFRA2O00451 464 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 ADAM23O75077 832 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 APBB3O95704 486 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 ATP1A3P13637 1013 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 CYP11B1P15538 503 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 KRT9P35527 623 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 PTPN20Q4JDL3 420 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 PRR23BQ6ZRT6 265 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 TAC4Q86UU9 113 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 ADAM32Q8TC27 787 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 PPP1R13BQ96KQ4 1090 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 STK33Q9BYT3 514 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 CLEC4EQ9ULY5 219 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 DMXL1Q9Y485 3027 aa21.37■■□□□ 1.01
VTI1B-205ENST00000555543 CCDC163A0A0D9SF12 145 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 LGALS16A8MUM7 142 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 TSPAN3O60637 253 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 ERBB2P04626 1255 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 TPM2P07951 284 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 TBX4P57082 545 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 BPIFB4P59827 614 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 PITX1P78337 314 aaPredicted RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 SIM2Q14190 667 aaPredicted RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 SYCP1Q15431 976 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 CRY1Q16526 586 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 PREPLQ4J6C6 727 aaPredicted RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 FKBP15Q5T1M5 1219 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 TAF3Q5VWG9 929 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 EGFLAMQ63HQ2 1017 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 BEND5Q7L4P6 421 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 NOP9Q86U38 636 aaKnown RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 ZNF513Q8N8E2 541 aaPredicted RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 TSTD1Q8NFU3 115 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 DDX1Q92499 740 aaKnown RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 RUBCNQ92622 972 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 FCRL2Q96LA5 508 aaPredicted RBP21.36■■□□□ 1.01
VTI1B-205ENST00000555543 POPDC2Q9HBU9 364 aa21.36■■□□□ 1.01
VTI1B-205ENST00000555543 FAM170AA1A519 330 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 AXIN1O15169 862 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 LATS1O95835 1130 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 CNR2P34972 360 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 SGSHP51688 502 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 POLR2FP61218 127 aaKnown RBP21.35■■□□□ 1.01
VTI1B-205ENST00000555543 YWHAZP63104 245 aaKnown RBP21.35■■□□□ 1.01
VTI1B-205ENST00000555543 RING1Q06587 406 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 HSF5Q4G112 596 aaPredicted RBP21.35■■□□□ 1.01
VTI1B-205ENST00000555543 FAM133BQ5BKY9 247 aaKnown RBP21.35■■□□□ 1.01
VTI1B-205ENST00000555543 ADGRF1Q5T601 910 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 FAM183BPQ6ZVS7 135 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 EPS8L1Q8TE68 723 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 DDI1Q8WTU0 396 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 GAB3Q8WWW8 586 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 SERPINB11Q96P15 392 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 ACOX2Q99424 681 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 HINFPQ9BQA5 517 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 EBF1Q9UH73 591 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 STARD13Q9Y3M8 1113 aa21.35■■□□□ 1.01
VTI1B-205ENST00000555543 MYO18AQ92614 2054 aaKnown RBP21.35■■□□□ 1.01
VTI1B-205ENST00000555543 GOLGA6L7A0A1B0GV03 622 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 LRRC10BA6NIK2 292 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 CYBBP04839 570 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 HOXD9P28356 352 aaPredicted RBP21.34■■□□□ 1.01
VTI1B-205ENST00000555543 JAM2P57087 298 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 NNTQ13423 1086 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 GEN1Q17RS7 908 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 NUGGCQ68CJ6 796 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 ANO7Q6IWH7 933 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 OLFML1Q6UWY5 402 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 DHX40Q8IX18 779 aaKnown RBP21.34■■□□□ 1.01
VTI1B-205ENST00000555543 ANKRD20A12PQ8NF67 263 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 SLC39A13Q96H72 371 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 NOX5Q96PH1 765 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 BPIFA3Q9BQP9 254 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 FUCA2Q9BTY2 467 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 TPSD1Q9BZJ3 242 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 NLRC4Q9NPP4 1024 aa21.34■■□□□ 1.01
VTI1B-205ENST00000555543 NCDNQ9UBB6 729 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms