RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 ADAM32Q8TC27 787 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 DQX1Q8TE96 717 aaKnown RBP12.61□□□□□ -0.39
SRP54-206ENST00000555317 DDI1Q8WTU0 396 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 DDX50Q9BQ39 737 aaKnown RBP12.61□□□□□ -0.39
SRP54-206ENST00000555317 FAM126AQ9BYI3 521 aaPredicted RBP12.61□□□□□ -0.39
SRP54-206ENST00000555317 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 FBRSL1Q9HCM7 1045 aaKnown RBP12.61□□□□□ -0.39
SRP54-206ENST00000555317 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 MARK1Q9P0L2 795 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 NAALADL1Q9UQQ1 740 aa12.61□□□□□ -0.39
SRP54-206ENST00000555317 MYO18AQ92614 2054 aaKnown RBP12.61□□□□□ -0.39
SRP54-206ENST00000555317 SYNJ2BP-COX16A0A087WUM0 186 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 A0A1B0GTH6 734 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 TEX33O43247 280 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 TULP3O75386 442 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 GRAP2O75791 330 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 KLKB1P03952 638 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 ERBB2P04626 1255 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 FERP16591 822 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 FANCCQ00597 558 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 SATB1Q01826 763 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 RING1Q06587 406 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 GAB4Q2WGN9 574 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 PTPN20Q4JDL3 420 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 C2orf27AQ580R0 203 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 ADGRF1Q5T601 910 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 NAA35Q5VZE5 725 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 MAMSTRQ6ZN01 415 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 TAC4Q86UU9 113 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 C12orf40Q86WS4 652 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 CPXM2Q8N436 756 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 SLC20A1Q8WUM9 679 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 RNF34Q969K3 372 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 C18orf8Q96DM3 657 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 PLK2Q9NYY3 685 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 COX16Q9P0S2 106 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 TJP2Q9UDY2 1190 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 SLC12A6Q9UHW9 1150 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 NOCTQ9UK39 431 aaKnown RBP12.6□□□□□ -0.39
SRP54-206ENST00000555317 TLR6Q9Y2C9 796 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 PCDHGA2Q9Y5H1 932 aa12.6□□□□□ -0.39
SRP54-206ENST00000555317 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 FAM170AA1A519 330 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 CACNG3O60359 315 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 DAB1O75553 588 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 TRUB2O95900 331 aaKnown RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 MOCS2O96007 188 aaPredicted RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 SLC2A3P11169 496 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 DGKGP49619 791 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 UBASH3AP57075 661 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 GAS6Q14393 721 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 TAF5Q15542 800 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 MPPE1Q53F39 396 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 C10orf76Q5T2E6 689 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 TSSK4Q6SA08 328 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 SLC26A9Q7LBE3 791 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 TRMT11Q7Z4G4 463 aaKnown RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 TERB1Q8NA31 727 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 CPA5Q8WXQ8 436 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 DDX1Q92499 740 aaKnown RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 ZSCAN32Q9NX65 697 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 STAP1Q9ULZ2 295 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
SRP54-206ENST00000555317 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
SRP54-206ENST00000555317 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 CHURC1-FNTBB4DL54 471 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 GOLGA8SH3BPF8 625 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 K7EQS6 105 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 IRAK2O43187 625 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 TSPAN3O60637 253 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 PENKP01210 267 aaPredicted RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 IGLV3-27P01718 113 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 FYNP06241 537 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 ABCB4P21439 1286 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 TIE1P35590 1138 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 NBL1P41271 181 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 NOMO3P69849 1222 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 MRPS21P82921 87 aaKnown RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 FMO1Q01740 532 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 ASIC2Q16515 512 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 SYPL2Q5VXT5 272 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRP54-206ENST00000555317 FANCMQ8IYD8 2048 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 MAML2Q8IZL2 1156 aaPredicted RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 DEFB106AQ8N104 65 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms