RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 HSPA13P48723 471 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 SERPINB9P50453 376 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 COPAP53621 1224 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 AQP5P55064 265 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 OTUD4Q01804 1114 aaKnown RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 TMEM132AQ24JP5 1023 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 KBTBD12Q3ZCT8 623 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 DENND1BQ6P3S1 775 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 C1orf228Q6PIY5 440 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 GADL1Q6ZQY3 521 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ARPINQ7Z6K5 226 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 PRRT2Q7Z6L0 340 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 TTC39CQ8N584 583 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 FBXO27Q8NI29 283 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ACTL9Q8TC94 416 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 TFAP2BQ92481 460 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 HAUS1Q96CS2 278 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 LRRC39Q96DD0 335 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 C12orf65Q9H3J6 166 aaKnown RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF696Q9H7X3 374 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 CYP3A43Q9HB55 503 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 PRMT7Q9NVM4 692 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 AGTPBP1Q9UPW5 1226 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 KAT6AQ92794 2004 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 LRRC37A2A6NM11 1700 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 SF3B1O75533 1304 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■■■■ 43.1
MTHFD1-210ENST00000555252 C2orf71A6NGG8 1288 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 A6NJR5 290 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 TRIM49D1C9J1S8 452 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 KRT38O76015 456 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 TNFAIP8O95379 198 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CLPTM1O96005 669 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 BPGMP07738 259 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 P4HA1P13674 534 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CD19P15391 556 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PRKCHP24723 683 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CRHR1P34998 444 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ELK3P41970 407 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 AQP4P55087 323 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PRKG1Q13976 671 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CCNIQ14094 377 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CHI3L2Q15782 390 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 FAM187BQ17R55 369 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 SATL1Q86VE3 508 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 GSTCDQ8NEC7 633 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 DIS3LQ8TF46 1054 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CMTM5Q96DZ9 223 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 RILPQ96NA2 401 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 KCNK16Q96T55 309 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 VRTNQ9H8Y1 702 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ETNK2Q9NVF9 386 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 KLHL11Q9NVR0 708 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 TBCCD1Q9NVR7 557 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 HSFX1Q9UBD0 423 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 BCAP29Q9UHQ4 241 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CHMP2BQ9UQN3 213 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 RPS6KL1Q9Y6S9 549 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ARHGAP42A6NI28 874 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 KBTBD13C9JR72 458 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 INO80B-WBP1J3KQ70 363 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 APOC4-APOC2K7ER74 178 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 VILLO15195 856 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PFDN1O60925 122 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 APOC2P02655 101 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 C1QAP02745 245 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 MCF2P10911 925 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ETS2P15036 469 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 TCF4P15884 667 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 L1CAMP32004 1257 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 FDFT1P37268 417 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PHKA2P46019 1235 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 SERPINB8P50452 374 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PSMC1P62191 440 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PDE1BQ01064 536 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 SLC25A11Q02978 314 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 FOLH1Q04609 750 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 STX3Q13277 289 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 DPYSL3Q14195 570 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 KCNJ11Q14654 390 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF484Q5JVG2 852 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 RABGAP1LQ5R372 815 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 TIFABQ6ZNK6 161 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 LRRC71Q8N4P6 559 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PIWIL2Q8TC59 973 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 LBHD1Q9BQE6 289 aaPredicted RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ADAM33Q9BZ11 813 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 INO80BQ9C086 356 aaPredicted RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CDT1Q9H211 546 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms