RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 EZH2Q15910 746 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RMND5BQ96G75 393 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ZDHHC6Q9H6R6 413 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SUCOQ9UBS9 1254 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TPRP12270 2363 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM120BA0PK00 339 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 BCLAF3A2AJT9 711 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SDR42E2A6NKP2 422 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 H7C1W4 665 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 GTPBP1O00178 669 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 OR7A10O76100 309 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TFPIP10646 304 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 PRDX5P30044 214 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ACAP2Q15057 778 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 HLFQ16534 295 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RNF19BQ6ZMZ0 732 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TFAP2DQ7Z6R9 452 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TRAPPC5Q8IUR0 188 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 COLGALT2Q8IYK4 626 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ATP6V1C2Q8NEY4 427 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 IDI2Q9BXS1 227 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 LY9Q9HBG7 655 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SH3D21A4FU49 640 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ACADLP28330 430 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ARHGDIBP52566 201 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 MTAPQ13126 283 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ACOT1Q86TX2 421 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 JAMLQ86YT9 394 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SEPT1Q8WYJ6 367 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 STRBPQ96SI9 672 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 OSBPL8Q9BZF1 889 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 B3GAT3O94766 335 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 S100A9P06702 114 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 HSPA13P48723 471 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SKP1P63208 163 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TRAP1Q12931 704 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 R3HDM1Q15032 1099 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 INTS7Q9NVH2 962 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ZNHIT2Q9UHR6 403 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 MTSS1O43312 755 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SLC25A12O75746 678 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 LARGE1O95461 756 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 CRTAMO95727 393 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 GLP2RO95838 553 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 CSF1RP07333 972 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TAF6P49848 677 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SETMARQ53H47 684 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 UTS2BQ765I0 119 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TERB1Q8NA31 727 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 KLHL23Q8NBE8 558 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 KCNB2Q92953 911 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 NIF3L1Q9GZT8 377 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 BARHL2Q9NY43 387 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 A0A1W2PRG6 482 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 DGAT1O75907 488 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 AGTP01019 485 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 POLR2EP19388 210 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 COMTP21964 271 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RFC5P40937 340 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 EPS8Q12929 822 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 CSHL1Q14406 222 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 PPIL6Q8IXY8 311 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 OR2W6PQ8NHA6 318 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 CGRRF1Q99675 332 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 GPATCH2LQ9NWQ4 482 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RCOR1Q9UKL0 485 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM94Q12767 1356 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 HSD17B3P37058 310 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 PJA1Q8NG27 643 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 SYTL5Q8TDW5 730 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 CATSPER2Q96P56 530 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM39AQ9NV64 488 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ARHGAP28Q9P2N2 729 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 VPS4BO75351 444 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 WARSP23381 471 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 PDX1P52945 283 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ATP2C1P98194 919 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RNASE12Q5GAN4 147 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 FBXO16Q8IX29 292 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RERGQ96A58 199 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 REPS1Q96D71 796 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 CDK5RAP1Q96SZ6 601 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 PLEKP08567 350 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 GMPSP49915 693 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-216ENST00000555002 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 MIEF2Q96C03 454 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM39BQ9GZU3 492 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 RACGAP1Q9H0H5 632 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 EPS8L2Q9H6S3 715 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 ZFYVE16Q7Z3T8 1539 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 KNTC1P50748 2209 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 TTC26A0AVF1 554 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SNAP23O00161 211 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PABPC1P11940 636 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ERCC2P18074 760 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 CYP2A7P20853 494 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GARTP22102 1010 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 HOXC12P31275 282 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GEMIN4P57678 1058 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms