RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 KDM7AQ6ZMT4 941 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ZNF365Q70YC5 407 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TAS1R1Q7RTX1 841 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 STAP1Q9ULZ2 295 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TTC4O95801 387 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 CYP2C18P33260 490 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ADRA1BP35368 520 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 GPR15P49685 360 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TSPY1Q01534 308 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ROR1Q01973 937 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TLE2Q04725 743 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 SLC39A12Q504Y0 691 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 RTP2Q5QGT7 225 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MFSD5Q6N075 450 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 C4orf50Q6ZRC1 276 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 P3H4Q92791 437 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 PGM2Q96G03 612 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 GORASP1Q9BQQ3 440 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 SMOC2Q9H3U7 446 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 DHX35Q9H5Z1 703 aaKnown RBP9.23□□□□□ -0.93
TDP1-210ENST00000554976 NMUR1Q9HB89 426 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 SCML2Q9UQR0 700 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 DCDC2CA8MYV0 355 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 HMGB1P1B2RPK0 211 aaPredicted RBP9.23□□□□□ -0.93
TDP1-210ENST00000554976 SGK1O00141 431 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MCF2LO15068 1137 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MFSD11O43934 449 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 GCATO75600 419 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 STIP1P31948 543 aaKnown RBP9.23□□□□□ -0.93
TDP1-210ENST00000554976 RFC2P35250 354 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MAGEA3P43357 314 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 GJA8P48165 433 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 DEUP1Q05D60 604 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 CEP85LQ5SZL2 805 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 FNBP1LQ5T0N5 605 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 BSPRYQ5W0U4 402 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MSANTD2Q6P1R3 559 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 FUT10Q6P4F1 479 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 CNKSR3Q6P9H4 555 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 C1orf228Q6PIY5 440 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 B4GALNT4Q76KP1 1039 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ZNF534Q76KX8 674 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 PPIL6Q8IXY8 311 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 SH2D3CQ8N5H7 860 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 FAM71DQ8N9W8 422 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ZSCAN18Q8TBC5 510 aaPredicted RBP9.23□□□□□ -0.93
TDP1-210ENST00000554976 RNF139Q8WU17 664 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MRPL9Q9BYD2 267 aaKnown RBP9.23□□□□□ -0.93
TDP1-210ENST00000554976 PLAC1Q9HBJ0 212 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 DONSONQ9NYP3 566 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 HELZP42694 1942 aaKnown RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 OR6C75A6NL08 312 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 ALOX15BO15296 676 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 HOXA2O43364 376 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 KIF1CO43896 1103 aaKnown RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 C1QAP02745 245 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 AMPD1P23109 780 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 RBL1P28749 1068 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 CTCFP49711 727 aaPredicted RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 VPS41P49754 854 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 CCL23P55773 120 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 YWHAGP61981 247 aaKnown RBP eCLIP9.22□□□□□ -0.93
TDP1-210ENST00000554976 USP46P62068 366 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 FASTKD3Q14CZ7 662 aaKnown RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 LRRC26Q2I0M4 334 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 SLC45A4Q5BKX6 768 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 VSTM1Q6UX27 236 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 RFX8Q6ZV50 586 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 PCGF5Q86SE9 256 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 SPATA2LQ8IUW3 424 aaPredicted RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 ZNF683Q8IZ20 524 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 SLC7A14Q8TBB6 771 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 DQX1Q8TE96 717 aaKnown RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 SPATA17Q96L03 361 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 B3GALT6Q96L58 329 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 COLEC11Q9BWP8 271 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 SLC12A6Q9UHW9 1150 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 PRG3Q9Y2Y8 225 aaPredicted RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 MTMR11A4FU01 709 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 CFAP69A5D8W1 941 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 GOLGA6CA6NDK9 693 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 C5orf60A6NFR6 353 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 IRAK2O43187 625 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 LINC00271P0C7V0 271 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 GOLGA6DP0CG33 693 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 NCAM1P13591 858 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 ZFXP17010 805 aaPredicted RBP9.22□□□□□ -0.93
TDP1-210ENST00000554976 GLUD2P49448 558 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 ZFYVE27Q5T4F4 411 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 GSTA5Q7RTV2 222 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 LRRC43Q8N309 656 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 ADAM32Q8TC27 787 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 FAM149B1Q96BN6 582 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms