RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ZNF398Q8TD17 642 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 FBF1Q8TES7 1133 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
SRP54-205ENST00000554803 KREMEN1Q96MU8 473 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 SCLT1Q96NL6 688 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 TMEM134Q9H6X4 195 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 TXLNGQ9NUQ3 528 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 KLHL14Q9P2G3 628 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 ANAPC5Q9UJX4 755 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 CITO14578 2027 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 LAMA5O15230 3695 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 C1QTNF9BB2RNN3 333 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 K7ERI5 159 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 TM4SF5O14894 197 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 B4GALT5O43286 388 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 ATP6V1G2O95670 118 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 LDHAP00338 332 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 GLUD1P00367 558 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PRKCBP05771 671 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 C1QTNF9P0C862 333 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 UNGP13051 313 aaPredicted RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 DARSP14868 501 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 TARSP26639 723 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 ALDH3A1P30838 453 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PHKA2P46019 1235 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 NSFP46459 744 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 LIMK1P53667 647 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 TFDP1Q14186 410 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 CRYMQ14894 314 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PARM1Q6UWI2 310 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 UNQ6494/PRO21346Q6UXR6 183 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 SPATA21Q7Z572 469 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 ANKS1BQ7Z6G8 1248 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PCGF5Q86SE9 256 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 EXOC3L1Q86VI1 746 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 ZNF410Q86VK4 478 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 APLFQ8IW19 511 aaPredicted RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 ZBTB8OSQ8IWT0 167 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 ZCCHC9Q8N567 271 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 ZSWIM2Q8NEG5 633 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 PCDHB18PQ96TA0 734 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 NELL2Q99435 816 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PRMT1Q99873 361 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 CBWD1Q9BRT8 395 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 TUBB6Q9BUF5 446 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 TARS2Q9BW92 718 aaKnown RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
SRP54-205ENST00000554803 DCLK3Q9C098 648 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 C2orf40Q9H1Z8 148 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PCIF1Q9H4Z3 704 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 EBF2Q9HAK2 575 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 PIDD1Q9HB75 910 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 ANAPC7Q9UJX3 599 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 EFR3BQ9Y2G0 817 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 STARD13Q9Y3M8 1113 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 LAMA1P25391 3075 aa11.59□□□□□ -0.55
SRP54-205ENST00000554803 COL4A2P08572 1712 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 TMEM120BA0PK00 339 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 INO80B-WBP1J3KQ70 363 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 LIN7AO14910 233 aaPredicted RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 TEX28O15482 410 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 PRPF4O43172 522 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRP54-205ENST00000554803 CYP26A1O43174 497 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 B4GALT3O60512 393 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 DCTN3O75935 186 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 LSM8O95777 96 aaKnown RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 SOD2P04179 222 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 CYP1A1P04798 512 aaPredicted RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 CCNB1P14635 433 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 ADSSP30520 456 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 ELF1P32519 619 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 EFNA5P52803 228 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 PFKPQ01813 784 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 POU5F1BQ06416 359 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 BNIP1Q12981 228 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 KLF1Q13351 362 aaPredicted RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 FZD5Q13467 585 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 PSMD6Q15008 389 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 SETDB1Q15047 1291 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 AMHR2Q16671 573 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 PARP6Q2NL67 630 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 NOMO2Q5JPE7 1267 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 HIBCHQ6NVY1 386 aaPredicted RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 GLB1LQ6UWU2 654 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 PRR23BQ6ZRT6 265 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 CDR2LQ86X02 465 aaPredicted RBP11.58□□□□□ -0.56
SRP54-205ENST00000554803 RCOR2Q8IZ40 523 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
SRP54-205ENST00000554803 BICD1Q96G01 975 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms