RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 RASAL2Q9UJF2 1139 aa25.42■■□□□ 1.66
FOXA1-204ENST00000554607 METTL12A8MUP2 240 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 BCAT2O15382 392 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 CER1O95813 267 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ZNF883P0CG24 379 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ACADMP11310 421 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 TPMTP51580 245 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 EIF4HQ15056 248 aaKnown RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 C1orf220Q5T0J3 134 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 DCAF12L1Q5VU92 463 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 FOXD4L5Q5VV16 416 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 CCNI2Q6ZMN8 369 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ANKS1BQ7Z6G8 1248 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ARHGAP18Q8N392 663 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ZCCHC9Q8N567 271 aaKnown RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 FOXD4L4Q8WXT5 416 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 NIF3L1Q9GZT8 377 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ELOVL2Q9NXB9 296 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 CFAP45Q9UL16 551 aa25.41■■□□□ 1.66
FOXA1-204ENST00000554607 ANKRD11Q6UB99 2663 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-204ENST00000554607 TIMM44O43615 452 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 CILPO75339 1184 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 IGLV3-19P01714 112 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 CORO1AP31146 461 aaKnown RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 EFEMP1Q12805 493 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 FOXD4L6Q3SYB3 417 aaPredicted RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 FOXD4L3Q6VB84 417 aaPredicted RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 PNPLA1Q8N8W4 532 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 SETD7Q8WTS6 366 aaKnown RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 P2RY11Q96G91 374 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 PIWIL1Q96J94 861 aaKnown RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 SLC2A11Q9BYW1 496 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 CCDC86Q9H6F5 360 aaKnown RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 APOBEC3GQ9HC16 384 aaKnown RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 KIAA1522Q9P206 1035 aaPredicted RBP25.4■■□□□ 1.66
FOXA1-204ENST00000554607 PCOLCE2Q9UKZ9 415 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 STRIP2Q9ULQ0 834 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 TRAF3IP3Q9Y228 551 aa25.4■■□□□ 1.66
FOXA1-204ENST00000554607 KCNJ18B7U540 433 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 CBFA2T3O75081 653 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 MYL1P05976 194 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 HMBSP08397 361 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 CD58P19256 250 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 MATKP42679 507 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 ZNF234Q14588 700 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 PPP1R26Q5T8A7 1209 aaPredicted RBP25.39■■□□□ 1.66
FOXA1-204ENST00000554607 INTS8Q75QN2 995 aaKnown RBP25.39■■□□□ 1.66
FOXA1-204ENST00000554607 CPXM2Q8N436 756 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 TTC39CQ8N584 583 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 UBXN6Q9BZV1 441 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 PCED1AQ9H1Q7 454 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 GAREM1Q9H706 876 aa25.39■■□□□ 1.66
FOXA1-204ENST00000554607 AGO1Q9UL18 857 aaKnown RBP25.39■■□□□ 1.66
FOXA1-204ENST00000554607 FREM2Q5SZK8 3169 aa25.39■■□□□ 1.65
FOXA1-204ENST00000554607 ACTN4O43707 911 aaKnown RBP25.38■■□□□ 1.65
FOXA1-204ENST00000554607 ZSCAN22P10073 491 aaPredicted RBP25.38■■□□□ 1.65
FOXA1-204ENST00000554607 KRT13P13646 458 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 GCLMP48507 274 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 ARID5AQ03989 594 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 ENPEPQ07075 957 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 DENND1CQ8IV53 801 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 TAS1R2Q8TE23 839 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 HEXIM2Q96MH2 286 aaKnown RBP25.38■■□□□ 1.65
FOXA1-204ENST00000554607 TM7SF3Q9NS93 570 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 MARCH2Q9P0N8 246 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 USP25Q9UHP3 1055 aa25.38■■□□□ 1.65
FOXA1-204ENST00000554607 RSRC2Q7L4I2 434 aaKnown RBP25.37■■□□□ 1.65
FOXA1-204ENST00000554607 DDI1Q8WTU0 396 aa25.37■■□□□ 1.65
FOXA1-204ENST00000554607 FAXDC2Q96IV6 333 aa25.37■■□□□ 1.65
FOXA1-204ENST00000554607 CDC6Q99741 560 aa25.37■■□□□ 1.65
FOXA1-204ENST00000554607 CIPCQ9C0C6 399 aa25.37■■□□□ 1.65
FOXA1-204ENST00000554607 GPSM3Q9Y4H4 160 aa25.37■■□□□ 1.65
FOXA1-204ENST00000554607 PCDHGB2Q9Y5G2 931 aa25.37■■□□□ 1.65
FOXA1-204ENST00000554607 F13A1P00488 732 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 EPHX1P07099 455 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 COPAP53621 1224 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 SLC8A3P57103 927 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 NFIL3Q16649 462 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 HLA-BQ31612 363 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 SERPINA13PQ6UXR4 307 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 SLCO6A1Q86UG4 719 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 CCDC47Q96A33 483 aaKnown RBP25.36■■□□□ 1.65
FOXA1-204ENST00000554607 IL21RQ9HBE5 538 aa25.36■■□□□ 1.65
FOXA1-204ENST00000554607 EIF2B4Q9UI10 523 aaKnown RBP25.36■■□□□ 1.65
FOXA1-204ENST00000554607 SLC12A8A0AV02 714 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 TRIM49P0CI25 452 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 TRIM49CP0CI26 452 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 NR2F2P24468 414 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 RPL13P26373 211 aaKnown RBP25.35■■□□□ 1.65
FOXA1-204ENST00000554607 PPP3CAQ08209 521 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 SUZ12Q15022 739 aaKnown RBP25.35■■□□□ 1.65
FOXA1-204ENST00000554607 ZNF394Q53GI3 561 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 DBX2Q6ZNG2 339 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 RBBP8NLQ8NC74 664 aaPredicted RBP25.35■■□□□ 1.65
FOXA1-204ENST00000554607 PLD4Q96BZ4 506 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 RCOR1Q9UKL0 485 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 NBEAQ8NFP9 2946 aa25.35■■□□□ 1.65
FOXA1-204ENST00000554607 FASNP49327 2511 aaKnown RBP25.34■■□□□ 1.65
FOXA1-204ENST00000554607 ADAMTS20P59510 1910 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms