RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 THPOP40225 353 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 RABIFP47224 123 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 PPP5CP53041 499 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 SCAND1P57086 179 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 MRPS6P82932 125 aaKnown RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 RUNX1T1Q06455 604 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 PPIDQ08752 370 aaKnown RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 VEPH1Q14D04 833 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 HSDL1Q3SXM5 330 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 C5orf22Q49AR2 442 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 IFIT1BQ5T764 474 aaKnown RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 C1orf185Q5T7R7 199 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 LEKR1Q6ZMV7 388 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 RUFY4Q6ZNE9 571 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 LRRC69Q6ZNQ3 347 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 NLRX1Q86UT6 975 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 LINC01465Q8N7H1 131 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 C3orf20Q8ND61 904 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 SLC22A8Q8TCC7 542 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF483Q8TF39 744 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 DDI1Q8WTU0 396 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 LMBR1Q8WVP7 490 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 METTL21AQ8WXB1 218 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 USP13Q92995 863 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 EXOC4Q96A65 974 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 TMIGD2Q96BF3 282 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 ZSCAN31Q96LW9 406 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 NECTIN4Q96NY8 510 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 SLC2A13Q96QE2 648 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 TAAR9Q96RI9 348 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 IFIH1Q9BYX4 1025 aaKnown RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 RNPEPQ9H4A4 650 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 CLSTN2Q9H4D0 955 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 SMARCAD1Q9H4L7 1026 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 ORC3Q9UBD5 711 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 MTRF1LQ9UGC7 380 aaKnown RBP2.84□□□□□ -1.96
PRPF39-206ENST00000554429 FBXL21Q9UKT6 434 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 CLEC4AQ9UMR7 237 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 SRPK3Q9UPE1 567 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 TRPV2Q9Y5S1 764 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 IRAK3Q9Y616 596 aa2.84□□□□□ -1.96
PRPF39-206ENST00000554429 CHURC1-FNTBB4DL54 471 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MEIS2O14770 477 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF213O14771 459 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GRM6O15303 877 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 INPPL1O15357 1258 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MAGEB3O15480 346 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FMO6PO60774 539 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 URI1O94763 535 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FSBPO95073 299 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SLU7O95391 586 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 EFEMP2O95967 443 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ITGB1P05556 798 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF286BP0CG31 522 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SRGAP2BP0DMP2 458 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 APEHP13798 732 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ALOX15P16050 662 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PORP16435 677 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 TNFSF4P23510 183 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PTGS2P35354 604 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PIK3CBP42338 1070 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ATP1A2P50993 1020 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CLCN5P51795 746 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 POLGP54098 1239 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF200P98182 395 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 NRG1Q02297 640 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GABPB1Q06547 395 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ACTN3Q08043 901 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 TROAPQ12815 778 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 DPYSQ14117 519 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GIT2Q14161 759 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GNA13Q14344 377 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 LASP1Q14847 261 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FAM209AQ5JX71 171 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ANKRD54Q6NXT1 300 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 NXPE4Q6UWF7 544 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 B3GNT9Q6UX72 402 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF783Q6ZMS7 281 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MTDHQ86UE4 582 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 RTN4RL1Q86UN2 441 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FCHSD1Q86WN1 690 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 LIX1LQ8IVB5 337 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SLC22A9Q8IVM8 553 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PHTF2Q8N3S3 785 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ANKS4BQ8N8V4 417 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ATG16L2Q8NAA4 619 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 IL31RAQ8NI17 732 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SLC35G2Q8TBE7 412 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MIPOL1Q8TD10 442 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 TUBGCP3Q96CW5 907 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CHFRQ96EP1 664 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ATP6V1G3Q96LB4 118 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FAM227BQ96M60 508 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ADAM19Q9H013 955 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 BHMT2Q9H2M3 363 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SERHL2Q9H4I8 314 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CWH43Q9H720 699 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CYP4F12Q9HCS2 524 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PDE7BQ9NP56 450 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms