RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 OLIG1Q8TAK6 271 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 KREMEN1Q96MU8 473 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 SLC2A11Q9BYW1 496 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 ST7Q9NRC1 585 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 SFMBT1Q9UHJ3 866 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 CNTN6Q9UQ52 1028 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 CEP250Q9BV73 2442 aa18.5■□□□□ 0.55
FOXN3-204ENST00000553840 ABCA7Q8IZY2 2146 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 BCLAF3A2AJT9 711 aaKnown RBP18.49■□□□□ 0.55
FOXN3-204ENST00000553840 GFRA2O00451 464 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 PIK3R2O00459 728 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 NPC1O15118 1278 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 SART1O43290 800 aaKnown RBP18.49■□□□□ 0.55
FOXN3-204ENST00000553840 CAVIN2O95810 425 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 LATS1O95835 1130 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 LTFP02788 710 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 P2RY2P41231 377 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 WASP42768 502 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 ACADSBP45954 432 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 MTIF2P46199 727 aaKnown RBP18.49■□□□□ 0.55
FOXN3-204ENST00000553840 DHPSP49366 369 aaPredicted RBP18.49■□□□□ 0.55
FOXN3-204ENST00000553840 SF3A2Q15428 464 aaKnown RBP18.49■□□□□ 0.55
FOXN3-204ENST00000553840 IL31Q6EBC2 164 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 LPCAT2Q7L5N7 544 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 DDX1Q92499 740 aaKnown RBP18.49■□□□□ 0.55
FOXN3-204ENST00000553840 ZSWIM1Q9BR11 485 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 CLSTN2Q9H4D0 955 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 DCHS1Q96JQ0 3298 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 CEP192Q8TEP8 1941 aa18.49■□□□□ 0.55
FOXN3-204ENST00000553840 GTPBP10A4D1E9 387 aaKnown RBP18.48■□□□□ 0.55
FOXN3-204ENST00000553840 BCKDHBP21953 392 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 DPP6P42658 865 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 LIMK1P53667 647 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 STARD3Q14849 445 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 MEA1Q16626 185 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 EXOC3L4Q17RC7 722 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 SPDYCQ5MJ68 293 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 NUGGCQ68CJ6 796 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 MSANTD2Q6P1R3 559 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 CYP2U1Q7Z449 544 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 ANKS1BQ7Z6G8 1248 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 UNC45BQ8IWX7 931 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 FAM217AQ8IXS0 508 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 IPO4Q8TEX9 1081 aaKnown RBP18.48■□□□□ 0.55
FOXN3-204ENST00000553840 RLN3Q8WXF3 142 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 GABRG3Q99928 467 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 CRACR2AQ9BSW2 395 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 TRIM62Q9BVG3 475 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 MIS12Q9H081 205 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 APEX2Q9UBZ4 518 aa18.48■□□□□ 0.55
FOXN3-204ENST00000553840 DCDC2BA2VCK2 349 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 THAP12O43422 761 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 GDF9O60383 454 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 ZNF217O75362 1048 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 LETM1O95202 739 aaPredicted RBP18.47■□□□□ 0.55
FOXN3-204ENST00000553840 CALCAP01258 141 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 GABRG2P18507 467 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 GNA15P30679 374 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 USP8P40818 1118 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 ARID5AQ03989 594 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 EIF4HQ15056 248 aaKnown RBP18.47■□□□□ 0.55
FOXN3-204ENST00000553840 ADGRF1Q5T601 910 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 SLC36A4Q6YBV0 504 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 ZNF606Q8WXB4 792 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 TMA16Q96EY4 203 aaKnown RBP18.47■□□□□ 0.55
FOXN3-204ENST00000553840 ACOX2Q99424 681 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 NUP62CLQ9H1M0 184 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 THAP9Q9H5L6 903 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 HCN2Q9UL51 889 aa18.47■□□□□ 0.55
FOXN3-204ENST00000553840 A0A1W2PQF6 199 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 KHNYNO15037 678 aaKnown RBP18.46■□□□□ 0.55
FOXN3-204ENST00000553840 AP5Z1O43299 807 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 MSI1O43347 362 aaKnown RBP18.46■□□□□ 0.55
FOXN3-204ENST00000553840 TIMM44O43615 452 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 NCAM1P13591 858 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 PRKCSHP14314 528 aaPredicted RBP18.46■□□□□ 0.55
FOXN3-204ENST00000553840 SLC9A1P19634 815 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 GPD2P43304 727 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 SLC11A2P49281 568 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 RING1Q06587 406 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 ARHGAP44Q17R89 818 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 MAP7D1Q3KQU3 841 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 SMYD5Q6GMV2 418 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 SCUBE3Q8IX30 993 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 STK32AQ8WU08 396 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 FAM149B1Q96BN6 582 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 DDX50Q9BQ39 737 aaKnown RBP18.46■□□□□ 0.55
FOXN3-204ENST00000553840 IRX2Q9BZI1 471 aaPredicted RBP18.46■□□□□ 0.55
FOXN3-204ENST00000553840 SMOC1Q9H4F8 434 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 CACNA2D2Q9NY47 1150 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 CALCOCO1Q9P1Z2 691 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 STOML2Q9UJZ1 356 aa18.46■□□□□ 0.55
FOXN3-204ENST00000553840 MED19A0JLT2 244 aaPredicted RBP18.45■□□□□ 0.54
FOXN3-204ENST00000553840 TYW5A2RUC4 315 aaKnown RBP18.45■□□□□ 0.54
FOXN3-204ENST00000553840 CAPN9O14815 690 aa18.45■□□□□ 0.54
FOXN3-204ENST00000553840 TSPAN3O60637 253 aa18.45■□□□□ 0.54
FOXN3-204ENST00000553840 GABBR2O75899 941 aa18.45■□□□□ 0.54
FOXN3-204ENST00000553840 ERCC5P28715 1186 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms