RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ATXN2Q99700 1313 aaKnown RBP19.03■□□□□ 0.64
SHMT2-206ENST00000553529 THAP12O43422 761 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 HOXB2P14652 356 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 COG7P83436 770 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 KCNMA1Q12791 1236 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 CETN1Q12798 172 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 SYPL2Q5VXT5 272 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 NADSYN1Q6IA69 706 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 ARHGAP18Q8N392 663 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 WDTC1Q8N5D0 677 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 MLKLQ8NB16 471 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 OLIG1Q8TAK6 271 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 ZNF606Q8WXB4 792 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 BCCIPQ9P287 314 aaKnown RBP eCLIP19.03■□□□□ 0.64
SHMT2-206ENST00000553529 FBXO10Q9UK96 956 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 STRIP2Q9ULQ0 834 aa19.03■□□□□ 0.64
SHMT2-206ENST00000553529 THADAQ6YHU6 1953 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 TNRC6BQ9UPQ9 1833 aaKnown RBP19.02■□□□□ 0.64
SHMT2-206ENST00000553529 MUC22E2RYF6 1773 aaPredicted RBP19.02■□□□□ 0.64
SHMT2-206ENST00000553529 E5RJQ4 531 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 PAPSS1O43252 624 aaPredicted RBP19.02■□□□□ 0.64
SHMT2-206ENST00000553529 LTFP02788 710 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 HOXD9P28356 352 aaPredicted RBP19.02■□□□□ 0.64
SHMT2-206ENST00000553529 GNA15P30679 374 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 MPLP40238 635 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 KLK7P49862 253 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 CREB5Q02930 508 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 CSRP2Q16527 193 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 EOGTQ5NDL2 527 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 TADA2BQ86TJ2 420 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 CACUL1Q86Y37 369 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 FAM217AQ8IXS0 508 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 PGBD3Q8N328 593 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 RNF139Q8WU17 664 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 PLD4Q96BZ4 506 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 ZC3H10Q96K80 434 aaKnown RBP19.02■□□□□ 0.64
SHMT2-206ENST00000553529 XPO6Q96QU8 1125 aaKnown RBP19.02■□□□□ 0.64
SHMT2-206ENST00000553529 FSCN3Q9NQT6 498 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 CALCOCO1Q9P1Z2 691 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 WDR35Q9P2L0 1181 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 APEX2Q9UBZ4 518 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 KIAA1257Q9ULG3 409 aa19.02■□□□□ 0.64
SHMT2-206ENST00000553529 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 GFRA2O00451 464 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 NDUFV2P19404 249 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 IL12RB1P42701 662 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 PTGER3P43115 390 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 TPD52L1Q16890 204 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-206ENST00000553529 EXOC3L4Q17RC7 722 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 MAP7D1Q3KQU3 841 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 PMS2CLQ68D20 193 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 GBP6Q6ZN66 633 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 C11orf57Q6ZUT1 292 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-206ENST00000553529 TAC4Q86UU9 113 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 TMEFF1Q8IYR6 380 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 CHPFQ8IZ52 775 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 ZNF366Q8N895 744 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 DQX1Q8TE96 717 aaKnown RBP19.01■□□□□ 0.63
SHMT2-206ENST00000553529 DDI1Q8WTU0 396 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 PRICKLE1Q96MT3 831 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-206ENST00000553529 CDK5RAP1Q96SZ6 601 aaKnown RBP19.01■□□□□ 0.63
SHMT2-206ENST00000553529 ABCC13Q9NSE7 274 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 TAB2Q9NYJ8 693 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 DNAJC12Q9UKB3 198 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 FHOD1Q9Y613 1164 aa19.01■□□□□ 0.63
SHMT2-206ENST00000553529 FGFR1OPO95684 399 aaKnown RBP19■□□□□ 0.63
SHMT2-206ENST00000553529 IGLV3-27P01718 113 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 NCAM1P13591 858 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 PRKCSHP14314 528 aaPredicted RBP19■□□□□ 0.63
SHMT2-206ENST00000553529 PRKCHP24723 683 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 NTSR1P30989 418 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 P2RY2P41231 377 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 MAN2A1Q16706 1144 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 FAM133BQ5BKY9 247 aaKnown RBP19■□□□□ 0.63
SHMT2-206ENST00000553529 PLA2G2CQ5R387 149 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 MSANTD2Q6P1R3 559 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 CLEC17AQ6ZS10 378 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 DGLUCYQ7Z3D6 616 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 SLC47A2Q86VL8 602 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 CYB5D2Q8WUJ1 264 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 SHC3Q92529 594 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 FAM149B1Q96BN6 582 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 FCRL2Q96LA5 508 aaPredicted RBP19■□□□□ 0.63
SHMT2-206ENST00000553529 CPXM1Q96SM3 734 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 SLC4A5Q9BY07 1137 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 THAP9Q9H5L6 903 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 STARD13Q9Y3M8 1113 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 CEP250Q9BV73 2442 aa19■□□□□ 0.63
SHMT2-206ENST00000553529 KCNJ18B7U540 433 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 FOXN3O00409 490 aaPredicted RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 GRAP2O75791 330 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 HLA-EP13747 358 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 HLA-FP30511 346 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 CLCN1P35523 988 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 RPL34P49207 117 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 DHPSP49366 369 aaPredicted RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 LMNB2Q03252 620 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 PDCLQ13371 301 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 KCNJ12Q14500 433 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 VWA3BQ502W6 1294 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms