RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MIS12Q9H081 205 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 CACNA2D2Q9NY47 1150 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 FBXO10Q9UK96 956 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 CLEC4EQ9ULY5 219 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 A0A1W2PQF6 199 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
CDK4-215ENST00000553237 SLC30A4O14863 429 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 MAP3K13O43283 966 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 FOXD2O60548 495 aaPredicted RBP16.6■□□□□ 0.25
CDK4-215ENST00000553237 TSPAN3O60637 253 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 CAVIN2O95810 425 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 CYBBP04839 570 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 GABRG2P18507 467 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 P2RY2P41231 377 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 DHPSP49366 369 aaPredicted RBP16.6■□□□□ 0.25
CDK4-215ENST00000553237 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
CDK4-215ENST00000553237 MFAP3P55082 362 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 APBA1Q02410 837 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 MAP7D1Q3KQU3 841 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 PMS2CLQ68D20 193 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 GJB7Q6PEY0 223 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 IRF2BP1Q8IU81 584 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 VPS45Q9NRW7 570 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 MBD1Q9UIS9 605 aaPredicted RBP16.6■□□□□ 0.25
CDK4-215ENST00000553237 HBS1LQ9Y450 684 aaKnown RBP16.6■□□□□ 0.25
CDK4-215ENST00000553237 RAD54BQ9Y620 910 aa16.6■□□□□ 0.25
CDK4-215ENST00000553237 SPTBN2O15020 2390 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 WASH3PC4AMC7 463 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
CDK4-215ENST00000553237 SLC9A1P19634 815 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 TPD52L1Q16890 204 aaPredicted RBP16.59■□□□□ 0.25
CDK4-215ENST00000553237 GEN1Q17RS7 908 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 KIAA1211LQ6NV74 962 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 TMEFF1Q8IYR6 380 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 SCML4Q8N228 414 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 MLKLQ8NB16 471 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
CDK4-215ENST00000553237 SPACA7Q96KW9 195 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 HSFY1Q96LI6 401 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 ST7Q9NRC1 585 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 CNTN6Q9UQ52 1028 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 SLC27A6Q9Y2P4 619 aa16.59■□□□□ 0.25
CDK4-215ENST00000553237 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 ZBTB24O43167 697 aaPredicted RBP16.58■□□□□ 0.24
CDK4-215ENST00000553237 LTFP02788 710 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 USP8P40818 1118 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 GPD2P43304 727 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
CDK4-215ENST00000553237 ARHGAP44Q17R89 818 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 LPCAT2Q7L5N7 544 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 CYP2U1Q7Z449 544 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 SCUBE3Q8IX30 993 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 FAM217AQ8IXS0 508 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 DEFB119Q8N690 84 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 IRGQQ8WZA9 623 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 PIGKQ92643 395 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 GOLGA1Q92805 767 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 GABRG3Q99928 467 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 CALCOCO1Q9P1Z2 691 aa16.58■□□□□ 0.24
CDK4-215ENST00000553237 THAP12O43422 761 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 FBXO21O94952 628 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 NDUFV2P19404 249 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 KCNA4P22459 653 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
CDK4-215ENST00000553237 MPPE1Q53F39 396 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 STPG1Q5TH74 334 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 IL31Q6EBC2 164 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 MSANTD2Q6P1R3 559 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 ZNF606Q8WXB4 792 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 SORCS1Q8WY21 1168 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
CDK4-215ENST00000553237 PIWIL1Q96J94 861 aaKnown RBP16.57■□□□□ 0.24
CDK4-215ENST00000553237 SLC6A17Q9H1V8 727 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 CD248Q9HCU0 757 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 STON1Q9Y6Q2 735 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 NCOR2Q9Y618 2525 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 THADAQ6YHU6 1953 aa16.57■□□□□ 0.24
CDK4-215ENST00000553237 GOLGA6L7A0A1B0GV03 622 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 PATE3B3GLJ2 98 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 MED7O43513 233 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 FYNP06241 537 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 NCAM1P13591 858 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 GNA15P30679 374 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 PTGER3P43115 390 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 TBX4P57082 545 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 EXOC3L4Q17RC7 722 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 DPCR1Q3MIW9 517 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 ADGRF1Q5T601 910 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 ENOSF1Q7L5Y1 443 aa16.56■□□□□ 0.24
CDK4-215ENST00000553237 ANKS1BQ7Z6G8 1248 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms