RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 FGF11Q92914 225 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 CNDP2Q96KP4 475 aaKnown RBP13.6□□□□□ -0.23
VPS29-211ENST00000553128 CIPCQ9C0C6 399 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 NRSN2Q9GZP1 204 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 PCED1AQ9H1Q7 454 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 TLR8Q9NR97 1041 aaKnown RBP13.6□□□□□ -0.23
VPS29-211ENST00000553128 COMMD8Q9NX08 183 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 HMGXB4Q9UGU5 601 aa13.6□□□□□ -0.23
VPS29-211ENST00000553128 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
VPS29-211ENST00000553128 NPC1O15118 1278 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 ARHGAP6O43182 974 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 LDOC1O95751 146 aaPredicted RBP13.59□□□□□ -0.23
VPS29-211ENST00000553128 SEMA4FO95754 770 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 WNT1P04628 370 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 RARGP13631 454 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 CD27P26842 260 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 TAF1BQ53T94 588 aaPredicted RBP13.59□□□□□ -0.23
VPS29-211ENST00000553128 FBXL19Q6PCT2 694 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 SERPINA13PQ6UXR4 307 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 SV2BQ7L1I2 683 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 ANKS1BQ7Z6G8 1248 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 FAM181AQ8N9Y4 354 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 OR2T3Q8NH03 318 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 SLC2A14Q8TDB8 520 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 BAP1Q92560 729 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 JAKMIP2Q96AA8 810 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 CGRRF1Q99675 332 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 CLMPQ9H6B4 373 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 CSNK1G1Q9HCP0 422 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
VPS29-211ENST00000553128 STK17AQ9UEE5 414 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 ATP8B3O60423 1300 aa13.59□□□□□ -0.23
VPS29-211ENST00000553128 HHLA1C9JL84 531 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 ERVH48-1M5A8F1 160 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 KIAA0391O15091 583 aaKnown RBP13.58□□□□□ -0.24
VPS29-211ENST00000553128 IGHV4-34P06331 123 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 HMBSP08397 361 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 PLA2G4AP47712 749 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 GOLGA8FQ08AF8 430 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 GOLGA8DPQ0D2H9 430 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 KCNH2Q12809 1159 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 CAMK2GQ13555 558 aaPredicted RBP13.58□□□□□ -0.24
VPS29-211ENST00000553128 ALCAMQ13740 583 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 LY6DQ14210 128 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 SNRNP35Q16560 246 aaKnown RBP13.58□□□□□ -0.24
VPS29-211ENST00000553128 C10orf120Q5SQS8 335 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 ADAT2Q7Z6V5 191 aaKnown RBP13.58□□□□□ -0.24
VPS29-211ENST00000553128 EID2Q8N6I1 236 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 SAP25Q8TEE9 199 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 CYB5D2Q8WUJ1 264 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 UCMAQ8WVF2 138 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 TMEM176AQ96HP8 235 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
VPS29-211ENST00000553128 SLC6A18Q96N87 628 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 CLIC6Q96NY7 704 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 FBXO44Q9H4M3 255 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 CPNE5Q9HCH3 593 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 FAM49BQ9NUQ9 324 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 SCML2Q9UQR0 700 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 MYLKQ15746 1914 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 BSNQ9UPA5 3926 aa13.58□□□□□ -0.24
VPS29-211ENST00000553128 A0A087X0B3 334 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 H3BQV1 296 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 WNT9AO14904 365 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 STAU1O95793 577 aaKnown RBP13.57□□□□□ -0.24
VPS29-211ENST00000553128 GJB2P29033 226 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 CASP4P49662 377 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 RPS14P62263 151 aaKnown RBP13.57□□□□□ -0.24
VPS29-211ENST00000553128 TRPC3Q13507 836 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 PSMD6Q15008 389 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 RRAGBQ5VZM2 374 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 SCD5Q86SK9 330 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 LURAP1LQ8IV03 231 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 TSC1Q92574 1164 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 ELF4Q99607 663 aaPredicted RBP13.57□□□□□ -0.24
VPS29-211ENST00000553128 ARID3AQ99856 593 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 PANK2Q9BZ23 570 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 BTBD1Q9H0C5 482 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 AGO1Q9UL18 857 aaKnown RBP13.57□□□□□ -0.24
VPS29-211ENST00000553128 PLXNA2O75051 1894 aa13.57□□□□□ -0.24
VPS29-211ENST00000553128 VILLO15195 856 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 CLIC2O15247 247 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 TGFB1I1O43294 461 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 ITGAVP06756 1048 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 C1SP09871 688 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 ADORA2BP29275 332 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
VPS29-211ENST00000553128 CYP2J2P51589 502 aa13.56□□□□□ -0.24
VPS29-211ENST00000553128 BCAT1P54687 386 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms