RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 BBS9Q3SYG4 887 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 SH2D4BQ5SQS7 431 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 TTC39BQ5VTQ0 682 aaPredicted RBP7.6□□□□□ -1.19
BEST3-212ENST00000553096 C1orf146Q5VVC0 180 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 DCUN1D2Q6PH85 259 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 RIPOR1Q6ZS17 1223 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 BBS12Q6ZW61 710 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 PASD1Q8IV76 773 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 ULK2Q8IYT8 1036 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 SAMD14Q8IZD0 417 aaPredicted RBP7.6□□□□□ -1.19
BEST3-212ENST00000553096 MTBPQ96DY7 904 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 FAM111AQ96PZ2 611 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 HAPLN3Q96S86 360 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 MTMR12Q9C0I1 747 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 NMUR2Q9GZQ4 415 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 FAM96AQ9H5X1 160 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 STN1Q9H668 368 aaKnown RBP7.6□□□□□ -1.19
BEST3-212ENST00000553096 PNPLA8Q9NP80 782 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 NRBP2Q9NSY0 501 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 ZNF180Q9UJW8 692 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 SLC45A1Q9Y2W3 748 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 IVNS1ABPQ9Y6Y0 642 aa7.6□□□□□ -1.19
BEST3-212ENST00000553096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 SMIM31A0A1B0GVY4 71 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 GOLGA8SH3BPF8 625 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 GOLGA8MH3BSY2 632 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ATP9BO43861 1147 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 HOXC6P09630 235 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 UBTFL6P0CB48 400 aaPredicted RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 SRGAP2CP0DJJ0 459 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 CSE1LP55060 971 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 LRP8Q14114 963 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 TTLL12Q14166 644 aaPredicted RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 FNBP1LQ5T0N5 605 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 LDLRAD1Q5T700 205 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 SLFN12LQ6IEE8 588 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 TMEM270Q6UE05 265 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 PLPPR4Q7Z2D5 763 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 CDR2LQ86X02 465 aaPredicted RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 CRLF3Q8IUI8 442 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 KBTBD2Q8IY47 623 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 DNAJC5GQ8N7S2 189 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 RNF149Q8NC42 400 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 SPATA33Q96N06 139 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 RNPEPQ9H4A4 650 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 PTPRHQ9HD43 1115 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ARHGEF4Q9NR80 690 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 CREBZFQ9NS37 354 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 PCMTD2Q9NV79 361 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 KLHL11Q9NVR0 708 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 PPARGC1AQ9UBK2 798 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 XPO7Q9UIA9 1087 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 CPSF3Q9UKF6 684 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 TMCO1Q9UM00 188 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 PLA2G4CQ9UP65 541 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 WASF2Q9Y6W5 498 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 TRPM7Q96QT4 1865 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 GOLGA8RI6L899 631 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 PRKCBP05771 671 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ENO1P06733 434 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 SERPINA6P08185 405 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 AMPD1P23109 780 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 CLCN3P51790 818 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 MBTD1Q05BQ5 628 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ARHGAP1Q07960 439 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 CDC16Q13042 620 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 EEF1DP3Q658K8 133 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 TAPT1Q6NXT6 567 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ZPBP2Q6X784 338 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 SLC26A11Q86WA9 606 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 CCNJLQ8IV13 435 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 TMEM35BQ8NCS4 154 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 RBM15BQ8NDT2 890 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 E2F7Q96AV8 911 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 OXCT2Q9BYC2 517 aaPredicted RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 IMPG2Q9BZV3 1241 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 KATNBL1Q9H079 304 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 EPB41L1Q9H4G0 881 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ZWILCHQ9H900 591 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 QPCTLQ9NXS2 382 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ATXN10Q9UBB4 475 aa7.59□□□□□ -1.19
BEST3-212ENST00000553096 ZNF638Q14966 1978 aaKnown RBP7.59□□□□□ -1.19
BEST3-212ENST00000553096 BIRC5O15392 142 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 MTRF1O75570 445 aaKnown RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 SNRPAP09012 282 aaKnown RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 PABPC4LP0CB38 370 aaKnown RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 RPL22P35268 128 aaKnown RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 TMPRSS15P98073 1019 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 OTUD4Q01804 1114 aaKnown RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 MED21Q13503 144 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 NCOA4Q13772 614 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 ITGA9Q13797 1035 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 HIC1Q14526 733 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 ATP13A4Q4VNC1 1196 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 C10orf62Q5T681 223 aaPredicted RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 IER5Q5VY09 327 aa7.58□□□□□ -1.2
BEST3-212ENST00000553096 THOC7Q6I9Y2 204 aaKnown RBP7.58□□□□□ -1.2
BEST3-212ENST00000553096 ARMCX2Q7L311 632 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms