RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TRIM74Q86UV6 250 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 TRIM73Q86UV7 250 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ZNF276Q8N554 614 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 NTPCRQ9BSD7 190 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 FRMD8P1Q9BZ68 369 aaPredicted RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 WDR55Q9H6Y2 383 aaPredicted RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CHADO15335 359 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 DHRS4L1P0CG22 281 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 COX4I1P13073 169 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CCDC14Q49A88 953 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 LAYNQ6UX15 382 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 FRMD7Q6ZUT3 714 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CCDC106Q9BWC9 280 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ARHGEF4Q9NR80 690 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 RFPL1O75677 317 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CSPG5O95196 566 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ERVK-10P10266 1014 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 GLRBP48167 497 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 NOMO1Q15155 1222 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CDKL3Q8IVW4 592 aaPredicted RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 RTKN2Q8IZC4 609 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 MZB1Q8WU39 189 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 BTBD7Q9P203 1132 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 THEGQ9P2T0 379 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 EPS15L1Q9UBC2 864 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 HESX1Q9UBX0 185 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ITGB3P05106 788 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TPP2P29144 1249 aaPredicted RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 SLC25A11Q02978 314 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 PDK1Q15118 436 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 NADK2Q4G0N4 442 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 PQLC1Q8N2U9 271 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 WDTC1Q8N5D0 677 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 RNF157Q96PX1 679 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 RIPK3Q9Y572 518 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 RPS6KL1Q9Y6S9 549 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 CAPN14A8MX76 684 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 E7ESA3 106 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 CASQ2O14958 399 aaPredicted RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 WDR46O15213 610 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 USP12O75317 370 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 MGAT1P26572 445 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 NAMPTP43490 491 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 LSAMPQ13449 338 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 PAOXQ6QHF9 649 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 ZBTB46Q86UZ6 589 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TMEM130Q8N3G9 435 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 CDHR1Q96JP9 859 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 CNPY3Q9BT09 278 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 DCUN1D5Q9BTE7 237 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TLK1Q9UKI8 766 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TRDMT1O14717 391 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 OATP04181 439 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM58BPP0C7Q3 252 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 SOX11P35716 441 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TGFB2P61812 414 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TBC1D25Q3MII6 688 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 BNC2Q6ZN30 1099 aaPredicted RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 C15orf39Q6ZRI6 1047 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 PID1Q7Z2X4 250 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 BRSK2Q8IWQ3 736 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 FBXW8Q8N3Y1 598 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 DCLK2Q8N568 766 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM156AQ8NDB6 213 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TTC16Q8NEE8 873 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 MOCOSQ96EN8 888 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 LENG8Q96PV6 779 aaPredicted RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM96AQ9H5X1 160 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 TCF7L2Q9NQB0 619 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
PPFIA2-227ENST00000552948 SLC15A5A6NIM6 579 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 GOLGA8TH3BQL2 631 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 MICAL2O94851 1124 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 CXCL8P10145 99 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 P4HA1P13674 534 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 EPHA3P29320 983 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 CRHR1P34998 444 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 IDH3AP50213 366 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 IFRD2Q12894 506 aaPredicted RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 CCNIQ14094 377 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 KLC3Q6P597 504 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TSHZ1Q6ZSZ6 1077 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 AMIGO2Q86SJ2 522 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 WDR49Q8IV35 697 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 ZNF669Q96BR6 464 aaPredicted RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 SGF29Q96ES7 293 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms