RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 SYN2Q92777 582 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CD101Q93033 1021 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ACDQ96AP0 544 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 DUSP16Q9BY84 665 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 TPSD1Q9BZJ3 242 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 MIS12Q9H081 205 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ECT2Q9H8V3 914 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ACP6Q9NPH0 428 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ABHD10Q9NUJ1 306 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CNTN6Q9UQ52 1028 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 HELZP42694 1942 aaKnown RBP11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ASPMQ8IZT6 3477 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 ANTXRLA6NF34 631 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 RTN3O95197 1032 aaPredicted RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 CSH1P0DML2 217 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 CSH2P0DML3 217 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 BCKDHBP21953 392 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 NSFP46459 744 aaKnown RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 GPR15P49685 360 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 PDGFRLQ15198 375 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 DDR2Q16832 855 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 UAP1L1Q3KQV9 507 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 SDHAF4Q5VUM1 108 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 PPP1R2P3Q6NXS1 205 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 DENND5BQ6ZUT9 1274 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 NOP9Q86U38 636 aaKnown RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 MON1AQ86VX9 555 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 CPA6Q8N4T0 437 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 C1orf131Q8NDD1 294 aaKnown RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 DEFB124Q8NES8 71 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 SLC20A1Q8WUM9 679 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 ZCCHC14Q8WYQ9 949 aaKnown RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 TFAP2BQ92481 460 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 GOLGA1Q92805 767 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 PKMYT1Q99640 499 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 AGPAT1Q99943 283 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 HAUS4Q9H6D7 363 aa11.93□□□□□ -0.5
TMEM116-218ENST00000552839 UXTQ9UBK9 157 aaPredicted RBP11.93□□□□□ -0.5
TMEM116-218ENST00000552839 MYOFQ9NZM1 2061 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 SOBPA7XYQ1 873 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 XPO1O14980 1071 aaKnown RBP11.92□□□□□ -0.5
TMEM116-218ENST00000552839 HYAL3O43820 417 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-218ENST00000552839 AKR1B10O60218 316 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 TADA3O75528 432 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 LSM8O95777 96 aaKnown RBP11.92□□□□□ -0.5
TMEM116-218ENST00000552839 MMEP08473 750 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 SKILP12757 684 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 ACADSBP45954 432 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 RGS7P49802 495 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 SLC5A3P53794 718 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 PDE4CQ08493 712 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 MTF1Q14872 753 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 ZNF77Q15935 545 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 MEA1Q16626 185 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 NAA35Q5VZE5 725 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 KIAA1211LQ6NV74 962 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 CLEC20AQ6ZU45 233 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 CYP2U1Q7Z449 544 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 RASSF3Q86WH2 238 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 NUP93Q8N1F7 819 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 TSTD1Q8NFU3 115 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 OSCP1Q8WVF1 389 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
TMEM116-218ENST00000552839 FBXO32Q969P5 355 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 EXOC4Q96A65 974 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 C8orf48Q96LL4 319 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 SLITRK1Q96PX8 696 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 CYP2S1Q96SQ9 504 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 FBXO44Q9H4M3 255 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 LUC7LQ9NQ29 371 aaKnown RBP11.92□□□□□ -0.5
TMEM116-218ENST00000552839 DUS2Q9NX74 493 aaKnown RBP11.92□□□□□ -0.5
TMEM116-218ENST00000552839 AIPL1Q9NZN9 384 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 PCDHGC3Q9UN70 934 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 WNT6Q9Y6F9 365 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 GON4LQ3T8J9 2241 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 SPEGQ15772 3267 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 ADAMTS20P59510 1910 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 PLXND1Q9Y4D7 1925 aa11.92□□□□□ -0.5
TMEM116-218ENST00000552839 FAM170AA1A519 330 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 ABL1P00519 1130 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 LCP1P13796 627 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-218ENST00000552839 DHPSP49366 369 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-218ENST00000552839 USP4Q13107 963 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 EML3Q32P44 896 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 ANO7Q6IWH7 933 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 PIGZQ86VD9 579 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 C11orf74Q86VG3 221 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms