RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 RUNX3Q13761 415 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 SLC44A4Q53GD3 710 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 BBS7Q8IWZ6 715 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 ADGRG2Q8IZP9 1017 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 CSGALNACT1Q8TDX6 532 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 ATP2A3Q93084 1043 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 NPY6RQ99463 290 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 CHP1Q99653 195 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 DDX23Q9BUQ8 820 aaKnown RBP13.67□□□□□ -0.22
CDK4-212ENST00000552388 LINC00597Q9H2U6 94 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 ARHGEF3Q9NR81 526 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 METTL5Q9NRN9 209 aaKnown RBP13.67□□□□□ -0.22
CDK4-212ENST00000552388 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK4-212ENST00000552388 STAP1Q9ULZ2 295 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 TLR6Q9Y2C9 796 aa13.67□□□□□ -0.22
CDK4-212ENST00000552388 OTOL1A6NHN0 477 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 SIGLEC16A6NMB1 481 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 SCAMP3O14828 347 aaKnown RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 GFRA3O60609 400 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 NFATC1O95644 943 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 HMBSP08397 361 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 KRT3P12035 628 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 GLULP15104 373 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 ARSAP15289 507 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 RRM1P23921 792 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 HARS2P49590 506 aaKnown RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 RNASE9P60153 205 aaKnown RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 PITX1P78337 314 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 PRKCQQ04759 706 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 MLF2Q15773 248 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 SLC18A3Q16572 532 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 ITPRIPL2Q3MIP1 535 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 PPP1R15BQ5SWA1 713 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 OTUD1Q5VV17 481 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 NUGGCQ68CJ6 796 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 PLEKHA7Q6IQ23 1121 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 TRNP1Q6NT89 227 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 ALKBH5Q6P6C2 394 aaKnown RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 BNIPLQ7Z465 357 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 UNC45BQ8IWX7 931 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 ADAM32Q8TC27 787 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 AZIN2Q96A70 460 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 TRIM11Q96F44 468 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 PGAP3Q96FM1 320 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 MSANTD3Q96H12 275 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 SELENOOQ9BVL4 669 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 ECT2Q9H8V3 914 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 NHEJ1Q9H9Q4 299 aaPredicted RBP13.66□□□□□ -0.22
CDK4-212ENST00000552388 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 HEBP1Q9NRV9 189 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 IMPACTQ9P2X3 320 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 STOML2Q9UJZ1 356 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 CA14Q9ULX7 337 aa13.66□□□□□ -0.22
CDK4-212ENST00000552388 ZFHX2Q9C0A1 2572 aaPredicted RBP13.65□□□□□ -0.22
CDK4-212ENST00000552388 KRBA1A5PL33 1030 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 C2CD4BA6NLJ0 364 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 LATS1O95835 1130 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 CYP17A1P05093 508 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 MYBL1P10243 752 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 GBP1P32455 592 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 STARD6P59095 220 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 GFPT1Q06210 699 aaPredicted RBP13.65□□□□□ -0.22
CDK4-212ENST00000552388 CCDC122Q5T0U0 273 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 DNAJC24Q6P3W2 148 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 DNAAF5Q86Y56 855 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 DENND1CQ8IV53 801 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 CPA6Q8N4T0 437 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 EMC1Q8N766 993 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 JOSD2Q8TAC2 188 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 PANX2Q96RD6 677 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 ADAM33Q9BZ11 813 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 DEF6Q9H4E7 631 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 C8orf33Q9H7E9 229 aaPredicted RBP13.65□□□□□ -0.22
CDK4-212ENST00000552388 FAM204AQ9H8W3 233 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 PARVAQ9NVD7 372 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 FAM86C1Q9NVL1 165 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
CDK4-212ENST00000552388 DDIT4Q9NX09 232 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 AGO1Q9UL18 857 aaKnown RBP13.65□□□□□ -0.22
CDK4-212ENST00000552388 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
CDK4-212ENST00000552388 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 M0QYT0 321 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 AKR1B10O60218 316 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 ENDOD1O94919 500 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 GJB6O95452 261 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 F9P00740 461 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 FECHP22830 423 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 GJA4P35212 333 aa13.64□□□□□ -0.23
CDK4-212ENST00000552388 RFC1P35251 1148 aaPredicted RBP13.64□□□□□ -0.23
CDK4-212ENST00000552388 CHKAP35790 457 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms