RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ANKRD11Q6UB99 2663 aaPredicted RBP22.75■■□□□ 1.23
SMARCD1-212ENST00000551966 NPC1O15118 1278 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 PRKCHP24723 683 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 CHKAP35790 457 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 MATKP42679 507 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 INCA1Q0VD86 236 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 TMEM215Q68D42 235 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 CCDC186Q7Z3E2 898 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 KIAA0895Q8NCT3 520 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 GOLGA5Q8TBA6 731 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 TMC2Q8TDI7 906 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 SORCS1Q8WY21 1168 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 PRCCQ92733 491 aaPredicted RBP22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 BBC3Q96PG8 261 aaPredicted RBP22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 NUP58Q9BVL2 599 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 KCTD10Q9H3F6 313 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 APOBEC3GQ9HC16 384 aaKnown RBP22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 AGO1Q9UL18 857 aaKnown RBP22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 ZNF510Q9Y2H8 683 aa22.74■■□□□ 1.23
SMARCD1-212ENST00000551966 A0A1B0GVT2 93 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 SYNCRIPO60506 623 aaKnown RBP22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 CER1O95813 267 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 HLA-DRAP01903 254 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 HMBSP08397 361 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 CSNK1EP49674 416 aaKnown RBP22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 PSEN1P49768 467 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 CLIC5Q9NZA1 410 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 BTBD3Q9Y2F9 522 aa22.73■■□□□ 1.23
SMARCD1-212ENST00000551966 IKBKBO14920 756 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 YEATS4O95619 227 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 CORO1AP31146 461 aaKnown RBP22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 COG7P83436 770 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 EFEMP1Q12805 493 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 IL27RAQ6UWB1 636 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 RHBDD1Q8TEB9 315 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 UCMAQ8WVF2 138 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 ZNF396Q96N95 335 aaPredicted RBP22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 NT5C1AQ9BXI3 368 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 DUSP16Q9BY84 665 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 BACH2Q9BYV9 841 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 RASAL2Q9UJF2 1139 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 PCDHGB2Q9Y5G2 931 aa22.72■■□□□ 1.23
SMARCD1-212ENST00000551966 RALAP11233 206 aa22.71■■□□□ 1.23
SMARCD1-212ENST00000551966 PPP1R26Q5T8A7 1209 aaPredicted RBP22.71■■□□□ 1.23
SMARCD1-212ENST00000551966 FAM124AQ86V42 546 aa22.71■■□□□ 1.23
SMARCD1-212ENST00000551966 CACUL1Q86Y37 369 aa22.71■■□□□ 1.23
SMARCD1-212ENST00000551966 DENND1CQ8IV53 801 aa22.71■■□□□ 1.23
SMARCD1-212ENST00000551966 DKK4Q9UBT3 224 aa22.71■■□□□ 1.23
SMARCD1-212ENST00000551966 KIF20AO95235 890 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 NR3C1P04150 777 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 EPHX1P07099 455 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 ACADMP11310 421 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 PIK3CAP42336 1068 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 CAMK2BQ13554 666 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 KIF19Q2TAC6 998 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 ANKS1BQ7Z6G8 1248 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 TADA2BQ86TJ2 420 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 CDC6Q99741 560 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 DCLK3Q9C098 648 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 CIPCQ9C0C6 399 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 C6orf106Q9H6K1 298 aaPredicted RBP22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 CYP3A43Q9HB55 503 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 PCDHA7Q9UN72 937 aa22.7■■□□□ 1.22
SMARCD1-212ENST00000551966 LOC400499M0QZD8 3231 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 TRABD2BA6NFA1 517 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 GOLGA8CPA6NN73 597 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 PDXKO00764 312 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 KCNK3O14649 394 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 FLRT2O43155 660 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 HLA-EP13747 358 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 CD58P19256 250 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 ACSL1P33121 698 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 CPXM2Q8N436 756 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 LRIG1Q96JA1 1093 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 SCUBE2Q9NQ36 999 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 SERTAD1Q9UHV2 236 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 SNX11Q9Y5W9 270 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 CKAP5Q14008 2032 aa22.69■■□□□ 1.22
SMARCD1-212ENST00000551966 C7P10643 843 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 PPP3CAQ08209 521 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 CYP4F3Q08477 520 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 EIF4HQ15056 248 aaKnown RBP22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 KMT5BQ4FZB7 885 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 RESP18Q5W5W9 173 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 CEP135Q66GS9 1140 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 FAM217AQ8IXS0 508 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 OR2T3Q8NH03 318 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 TAS1R2Q8TE23 839 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 DDI1Q8WTU0 396 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 CDK5RAP1Q96SZ6 601 aaKnown RBP22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 SLC2A11Q9BYW1 496 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 PCED1AQ9H1Q7 454 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 MARCH2Q9P0N8 246 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 CELSR3Q9NYQ7 3312 aa22.68■■□□□ 1.22
SMARCD1-212ENST00000551966 SLC12A8A0AV02 714 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 TIMM44O43615 452 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 TRIM21P19474 475 aaKnown RBP22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 GCLMP48507 274 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 VAMP7P51809 220 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms