RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SGK2Q9HBY8 427 aa16.1■□□□□ 0.17
CACNB3-220ENST00000551716 COL6A6A6NMZ7 2263 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 H3BQV1 296 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 AP1G2O75843 785 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 FSBPO95073 299 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 KCNH2Q12809 1159 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 CAMK2GQ13555 558 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-220ENST00000551716 TBC1D25Q3MII6 688 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 FBXL19Q6PCT2 694 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 PAQR9Q6ZVX9 377 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 SPACA3Q8IXA5 215 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 ZNF276Q8N554 614 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-220ENST00000551716 DNAJC19Q96DA6 116 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 PIWIL1Q96J94 861 aaKnown RBP16.09■□□□□ 0.17
CACNB3-220ENST00000551716 ELF4Q99607 663 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-220ENST00000551716 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
CACNB3-220ENST00000551716 PLA2G4CQ9UP65 541 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 SCML2Q9UQR0 700 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 SLCO1B1Q9Y6L6 691 aa16.09■□□□□ 0.17
CACNB3-220ENST00000551716 BRINP1O60477 761 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 DLATP10515 647 aaKnown RBP16.08■□□□□ 0.16
CACNB3-220ENST00000551716 C6P13671 934 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 IDEP14735 1019 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 TRIM21P19474 475 aaKnown RBP16.08■□□□□ 0.16
CACNB3-220ENST00000551716 ACADVLP49748 655 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 PSEN1P49768 467 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 CASP5P51878 434 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 TMPRSS3P57727 454 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 COG7P83436 770 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 IL9RQ01113 521 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 SFSWAPQ12872 951 aaKnown RBP16.08■□□□□ 0.16
CACNB3-220ENST00000551716 C10orf120Q5SQS8 335 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 FYB2Q5VWT5 728 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 USP49Q70CQ1 688 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 FAM181AQ8N9Y4 354 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 ZNF248Q8NDW4 579 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 TSC1Q92574 1164 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 GOLGA1Q92805 767 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
CACNB3-220ENST00000551716 LGMNQ99538 433 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 CIPCQ9C0C6 399 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 CSNK1G1Q9HCP0 422 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 KRT82Q9NSB4 513 aa16.08■□□□□ 0.16
CACNB3-220ENST00000551716 WISP1O95388 367 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 DNTTP04053 509 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 PRKCHP24723 683 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 ARRB1P49407 418 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-220ENST00000551716 PGFP49763 221 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 PDE4CQ08493 712 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 TTC31Q49AM3 519 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-220ENST00000551716 KCNT1Q5JUK3 1230 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 RRAGBQ5VZM2 374 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 CACUL1Q86Y37 369 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 SAP25Q8TEE9 199 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 PANK4Q9NVE7 773 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNB3-220ENST00000551716 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 CLCA2Q9UQC9 943 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 NCKAP1Q9Y2A7 1128 aa16.07■□□□□ 0.16
CACNB3-220ENST00000551716 STC2O76061 302 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 RARGP13631 454 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 GLDCP23378 1020 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 DNAJC3Q13217 504 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 PSMD6Q15008 389 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 SNRNP35Q16560 246 aaKnown RBP16.06■□□□□ 0.16
CACNB3-220ENST00000551716 ERICH1Q86X53 443 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 GATAD2AQ86YP4 633 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 LSMEM2Q8N112 164 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 RFFLQ8WZ73 363 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 ZNF578Q96N58 590 aaPredicted RBP16.06■□□□□ 0.16
CACNB3-220ENST00000551716 CGRRF1Q99675 332 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 SMOQ99835 787 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 ARID3AQ99856 593 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 VRTNQ9H8Y1 702 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 PCDHA5Q9Y5H7 936 aa16.06■□□□□ 0.16
CACNB3-220ENST00000551716 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 PHACTR2O75167 634 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 RALAP11233 206 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 CKMT2P17540 419 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 TXLNAP40222 546 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 MAP3K7CLP57077 242 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 PCBP4P57723 403 aaKnown RBP16.05■□□□□ 0.16
CACNB3-220ENST00000551716 MYL6P60660 151 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 E2F1Q01094 437 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 GRIN1Q05586 938 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 BMT2Q1RMZ1 405 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 KIAA0895LQ68EN5 471 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 LAYNQ6UX15 382 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 EID2Q8N6I1 236 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 RBBP8NLQ8NC74 664 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-220ENST00000551716 ZMIZ2Q8NF64 920 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 CCDC127Q96BQ5 260 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 EPSTI1Q96J88 318 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 XYLT2Q9H1B5 865 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 GDF3Q9NR23 364 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 OSER1Q9NX31 292 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms