RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ETF1P62495 437 aaKnown RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 SLC25A11Q02978 314 aaKnown RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ITIH3Q06033 890 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 CBX2Q14781 532 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 COL19A1Q14993 1142 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 TRIP4Q15650 581 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 HADHQ16836 314 aaKnown RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ATP13A4Q4VNC1 1196 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ZC3H12AQ5D1E8 599 aaKnown RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ATAT1Q5SQI0 421 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ZFYVE27Q5T4F4 411 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 MEI1Q5TIA1 1274 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 TXNRD3NBQ6F5E7 133 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 GET4Q7L5D6 327 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 BNIPLQ7Z465 357 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 RHOT1Q8IXI2 618 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ZNF276Q8N554 614 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 CCDC185Q8N715 623 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 HSPH1Q92598 858 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 KRT35Q92764 455 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ACSF2Q96CM8 615 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 PGAP3Q96FM1 320 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 MSLNLQ96KJ4 702 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 PSMB7Q99436 277 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 TASP1Q9H6P5 420 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 WDR6Q9NNW5 1121 aaKnown RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 TMPRSS4Q9NRS4 437 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 GKN1Q9NS71 199 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 KLHL11Q9NVR0 708 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 GPATCH2LQ9NWQ4 482 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 JRKLQ9Y4A0 524 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 CPQQ9Y646 472 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 DENND4CQ5VZ89 1909 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 BDP1A6H8Y1 2624 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 FANCGO15287 622 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 ZNF500O60304 480 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 OLFM2O95897 454 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 MOCS2O96007 188 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 KRT1P04264 644 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 ATP1A1P05023 1023 aaKnown RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 RARAP10276 462 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 KCNA5P22460 613 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 DDX6P26196 483 aaKnown RBP eCLIP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CASQ1P31415 396 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 AVPR1AP37288 418 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CXCR3P49682 368 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 KCNQ1P51787 676 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 RPS6KA1Q15418 735 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 KCNT1Q5JUK3 1230 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 KLHDC10Q6PID8 442 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 POTEHQ6S545 545 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CYP4V2Q6ZWL3 525 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CMTM8Q8IZV2 173 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 ALG3Q92685 438 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CD101Q93033 1021 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 WBP2Q969T9 261 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 FCRL2Q96LA5 508 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 RIPOR3Q96MK2 946 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 ZSWIM3Q96MP5 696 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 NAPGQ99747 312 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 NCAPGQ9BPX3 1015 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 SNRNP25Q9BV90 132 aaKnown RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 TLR10Q9BXR5 811 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 MAGEB5Q9BZ81 275 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 TKTL2Q9H0I9 626 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 WDCPQ9H6R7 721 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 ANLNQ9NQW6 1124 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CD207Q9UJ71 328 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 TLR6Q9Y2C9 796 aa10.69□□□□□ -0.7
RAB5C-207ENST00000550504 HBS1LQ9Y450 684 aaKnown RBP10.69□□□□□ -0.7
RAB5C-207ENST00000550504 CCDC66A2RUB6 948 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 CTAGE9A4FU28 777 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 MIF4GDA9UHW6 222 aaKnown RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 PI4K2BG5E9Z4 385 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 I6L893 689 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 SCAMP3O14828 347 aaKnown RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 DDX3YO15523 660 aaKnown RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 PSTPIP1O43586 416 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 STC2O76061 302 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 PRAMEF12O95522 483 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 APOEP02649 317 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 KRT7P08729 469 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 CTNNA2P26232 953 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 CCR1P32246 355 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 CXCR5P32302 372 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 CTNNA1P35221 906 aaKnown RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 ADRA1BP35368 520 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 GGCXP38435 758 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 MTHFRP42898 656 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 KPNA1P52294 538 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 COG7P83436 770 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 NNTQ13423 1086 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 EIF4EBP2Q13542 120 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-207ENST00000550504 PPP2R5DQ14738 602 aa10.68□□□□□ -0.7
RAB5C-207ENST00000550504 CA9Q16790 459 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms