RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, human

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF41-208	ENST00000550379	FCRL2	Q96LA5	508 aa	Predicted RBP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	NAP1L3	Q99457	506 aa	Predicted RBP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	WDCP	Q9H6R7	721 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	ZNF334	Q9HCZ1	680 aa	Predicted RBP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	PIGV	Q9NUD9	493 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	MTMR10	Q9NXD2	777 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	MARCH2	Q9P0N8	246 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	CLEC1B	Q9P126	229 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	CHORDC1	Q9UHD1	332 aa	Predicted RBP	7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	CDC23	Q9UJX2	597 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	FZD10	Q9ULW2	581 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	UST	Q9Y2C2	406 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	HYOU1	Q9Y4L1	999 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	RAD54B	Q9Y620	910 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	C2orf16	Q68DN1	1984 aa		7.99	□□□□□ -1.13
RNF41-208	ENST00000550379	DENND4A	Q7Z401	1863 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	HELZ	P42694	1942 aa	Known RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	E2F8	A0AVK6	867 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	DRGX	A6NNA5	263 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	COCH	O43405	550 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	RFPL2	O75678	378 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	RARA	P10276	462 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	HDC	P19113	662 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	IL4R	P24394	825 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	GABRR2	P28476	465 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CASQ1	P31415	396 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	LTBR	P36941	435 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CETN2	P41208	172 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CDKN2B	P42772	138 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	MTHFR	P42898	656 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	NAP1L1	P55209	391 aa	Known RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	TAS2R40	P59535	323 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	DEUP1	Q05D60	604 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	KLF1	Q13351	362 aa	Predicted RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CYP1B1	Q16678	543 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	WHAMMP3	Q1A5X7	153 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	ARHGAP15	Q53QZ3	475 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	TFDP3	Q5H9I0	405 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	SDHAF4	Q5VUM1	108 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	SYT10	Q6XYQ8	523 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379		Q6ZNB5	142 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	PDZD4	Q76G19	769 aa	Predicted RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	TAC4	Q86UU9	113 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CREG2	Q8IUH2	290 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	ZNF683	Q8IZ20	524 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CMTM8	Q8IZV2	173 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	SHKBP1	Q8TBC3	707 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	NDRG1	Q92597	394 aa	Known RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	FATE1	Q969F0	183 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	C16orf45	Q96MC5	204 aa	Predicted RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	GCNA	Q96QF7	691 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	OSBPL9	Q96SU4	736 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	PRMT1	Q99873	361 aa	Known RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	DDX50	Q9BQ39	737 aa	Known RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	SLC46A2	Q9BY10	475 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	RNF38	Q9H0F5	515 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	HOMER3	Q9NSC5	361 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	DDIT4	Q9NX09	232 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	CALCOCO1	Q9P1Z2	691 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	SLC12A6	Q9UHW9	1150 aa		7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.98	□□□□□ -1.13
RNF41-208	ENST00000550379	TRAV19	A0A0A6YYK7	116 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379		I6L893	689 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	SOX1	O00570	391 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	PER2	O15055	1255 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	GRAP2	O75791	330 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	STC2	O76061	302 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	GJB6	O95452	261 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ATP1A1	P05023	1023 aa	Known RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	SPATA31D3	P0C874	917 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ZFX	P17010	805 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	TFE3	P19532	575 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	KDELR1	P24390	212 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	CCR2	P41597	374 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	NR2C2	P49116	596 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	SULT1E1	P49888	294 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	TBX4	P57082	545 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	RNASE9	P60153	205 aa	Known RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	PITX1	P78337	314 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ATP11A	P98196	1134 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	C15orf59	Q2T9L4	293 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ATAT1	Q5SQI0	421 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	C10orf120	Q5SQS8	335 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ADGRF1	Q5T601	910 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	SH3PXD2A	Q5TCZ1	1133 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	DCAF12L1	Q5VU92	463 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	SLC9A4	Q6AI14	798 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	SPATA31D4	Q6ZUB0	917 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	BBS12	Q6ZW61	710 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	RSRC2	Q7L4I2	434 aa	Known RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	C17orf53	Q8N3J3	647 aa	Predicted RBP	7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	LZTR1	Q8N653	840 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ATP6V0D2	Q8N8Y2	350 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	TTC13	Q8NBP0	860 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	GPR152	Q8TDT2	470 aa		7.97	□□□□□ -1.13
RNF41-208	ENST00000550379	ADAMTS19	Q8TE59	1207 aa		7.97	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms