RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 GPR174Q9BXC1 333 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 PRDM16Q9HAZ2 1276 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 CYP3A43Q9HB55 503 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 WSB2Q9NYS7 404 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-222ENST00000550274 THAP10Q9P2Z0 257 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-222ENST00000550274 SUSD2Q9UGT4 822 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 CLEC4EQ9ULY5 219 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 USP3Q9Y6I4 520 aa13.22□□□□□ -0.29
LETMD1-222ENST00000550274 GCN1Q92616 2671 aaKnown RBP13.22□□□□□ -0.29
LETMD1-222ENST00000550274 KIF20AO95235 890 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 FTH1P19P0C7X4 201 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 PYGBP11216 843 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 NCAM1P13591 858 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 GNSP15586 552 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 PSEN1P49768 467 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 EFEMP1Q12805 493 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 HNRNPDQ14103 355 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 STARD3Q14849 445 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 ZNF394Q53GI3 561 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 WDR45BQ5MNZ6 344 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 METTL3Q86U44 580 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 CACUL1Q86Y37 369 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 ZCCHC9Q8N567 271 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 PNPLA1Q8N8W4 532 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 AGO1Q9UL18 857 aaKnown RBP13.21□□□□□ -0.29
LETMD1-222ENST00000550274 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.29
LETMD1-222ENST00000550274 A0A1B0GTW7 788 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 MEI4A8MW99 385 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 MAPK13O15264 365 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-222ENST00000550274 RALAP11233 206 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 PFKFB1P16118 471 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 TRIM21P19474 475 aaKnown RBP13.2□□□□□ -0.3
LETMD1-222ENST00000550274 NR2F2P24468 414 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 PRKCHP24723 683 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
LETMD1-222ENST00000550274 TPMTP51580 245 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 COPAP53621 1224 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 ZNF234Q14588 700 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 TADA2BQ86TJ2 420 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 PROSER1Q86XN7 944 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 TMPRSS6Q8IU80 811 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 RBBP8NLQ8NC74 664 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-222ENST00000550274 ADAMTS14Q8WXS8 1223 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 SORCS1Q8WY21 1168 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 IL21RQ9HBE5 538 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
LETMD1-222ENST00000550274 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 CHKAP35790 457 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 COG7P83436 770 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 BNC1Q01954 994 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 SCAPQ12770 1279 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 DCAF12L1Q5VU92 463 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
LETMD1-222ENST00000550274 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 DENND1CQ8IV53 801 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 CADM4Q8NFZ8 388 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
LETMD1-222ENST00000550274 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 ZDHHC5Q9C0B5 715 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 MIR1-1HGQ9H1L0 117 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 ELOVL2Q9NXB9 296 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 MARCH2Q9P0N8 246 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 PCDHB9Q9Y5E1 797 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 SLCO1B1Q9Y6L6 691 aa13.19□□□□□ -0.3
LETMD1-222ENST00000550274 METTL12A8MUP2 240 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 NPC1O15118 1278 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 SYNCRIPO60506 623 aaKnown RBP13.18□□□□□ -0.3
LETMD1-222ENST00000550274 IGLV3-19P01714 112 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 ZNF132P52740 706 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 RAD23BP54727 409 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 NFIL3Q16649 462 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 BHLHA9Q7RTU4 235 aa13.18□□□□□ -0.3
LETMD1-222ENST00000550274 SLCO6A1Q86UG4 719 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms