RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TAC4Q86UU9 113 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 ETFBKMTQ8IXQ9 262 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 ZNF397Q8NF99 534 aaPredicted RBP27.03■■□□□ 1.92
CPSF6-205ENST00000550075 ATOH1Q92858 354 aaPredicted RBP27.03■■□□□ 1.92
CPSF6-205ENST00000550075 IQCDQ96DY2 449 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 PIWIL1Q96J94 861 aaKnown RBP27.03■■□□□ 1.92
CPSF6-205ENST00000550075 SLC2A13Q96QE2 648 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 EDEM3Q9BZQ6 932 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 FAM204AQ9H8W3 233 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 PRMT8Q9NR22 394 aaPredicted RBP27.03■■□□□ 1.92
CPSF6-205ENST00000550075 CACNG3O60359 315 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 RNF40O75150 1001 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 APOEP02649 317 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 CYP1A1P04798 512 aaPredicted RBP27.02■■□□□ 1.92
CPSF6-205ENST00000550075 GRIA2P42262 883 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 SLC11A2P49281 568 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 KDSRQ06136 332 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 C12orf40Q86WS4 652 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 FAM217AQ8IXS0 508 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 ACDQ96AP0 544 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 DDX50Q9BQ39 737 aaKnown RBP27.02■■□□□ 1.92
CPSF6-205ENST00000550075 NUP58Q9BVL2 599 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 DNAJC17Q9NVM6 304 aaKnown RBP27.02■■□□□ 1.92
CPSF6-205ENST00000550075 RRN3Q9NYV6 651 aa27.02■■□□□ 1.92
CPSF6-205ENST00000550075 IRAK2O43187 625 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 TULP3O75386 442 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 KAT7O95251 611 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 TRUB2O95900 331 aaKnown RBP27.01■■□□□ 1.91
CPSF6-205ENST00000550075 CHRNB2P17787 502 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 GBP1P32455 592 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 CXCL12P48061 93 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 NHLH1Q02575 133 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 TAF5Q15542 800 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 ZNF528Q3MIS6 628 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 FIGNQ5HY92 759 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 FAM102AQ5T9C2 384 aaPredicted RBP27.01■■□□□ 1.91
CPSF6-205ENST00000550075 SYPL2Q5VXT5 272 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 GRAMD4Q6IC98 578 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 DEFB106AQ8N104 65 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 NAT16Q8N8M0 369 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 CPA5Q8WXQ8 436 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 BAP1Q92560 729 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 SEPT11Q9NVA2 429 aaKnown RBP27.01■■□□□ 1.91
CPSF6-205ENST00000550075 STOML2Q9UJZ1 356 aa27.01■■□□□ 1.91
CPSF6-205ENST00000550075 WDFY4Q6ZS81 3184 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 GRAP2O75791 330 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 NSFP46459 744 aaKnown RBP27■■□□□ 1.91
CPSF6-205ENST00000550075 SLC6A11P48066 632 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 GAS6Q14393 721 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 ASIC2Q16515 512 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 ADGRF1Q5T601 910 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 XYLT1Q86Y38 959 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 ADAM32Q8TC27 787 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 AZIN2Q96A70 460 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 FAM122AQ96E09 287 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 IRX2Q9BZI1 471 aaPredicted RBP27■■□□□ 1.91
CPSF6-205ENST00000550075 IFNKQ9P0W0 207 aa27■■□□□ 1.91
CPSF6-205ENST00000550075 LRRC53A6NM62 1247 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 CHURC1-FNTBB4DL54 471 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 CBFA2T2O43439 604 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 PENKP01210 267 aaPredicted RBP26.99■■□□□ 1.91
CPSF6-205ENST00000550075 SLC2A3P11169 496 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 NOS2P35228 1153 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 CSTF1Q05048 431 aaKnown RBP26.99■■□□□ 1.91
CPSF6-205ENST00000550075 MPPE1Q53F39 396 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 ZC3H14Q6PJT7 736 aaKnown RBP26.99■■□□□ 1.91
CPSF6-205ENST00000550075 TERB1Q8NA31 727 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 BHMTQ93088 406 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 FCRL2Q96LA5 508 aaPredicted RBP26.99■■□□□ 1.91
CPSF6-205ENST00000550075 AGPAT1Q99943 283 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 DDIT4Q9NX09 232 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 STAP1Q9ULZ2 295 aa26.99■■□□□ 1.91
CPSF6-205ENST00000550075 ACSL4O60488 711 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 PAPSS2O95340 614 aaPredicted RBP26.98■■□□□ 1.91
CPSF6-205ENST00000550075 IGLV3-25P01717 112 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 SP9P0CG40 484 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 MMP8P22894 467 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 TNFRSF4P43489 277 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 CENPCQ03188 943 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 CLEC16AQ2KHT3 1053 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 SFMBT2Q5VUG0 894 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 MMS22LQ6ZRQ5 1243 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 DDI1Q8WTU0 396 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 EZH1Q92800 747 aaPredicted RBP26.98■■□□□ 1.91
CPSF6-205ENST00000550075 SLC39A13Q96H72 371 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 FAM126AQ9BYI3 521 aaPredicted RBP26.98■■□□□ 1.91
CPSF6-205ENST00000550075 TTYH3Q9C0H2 523 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 NUCKS1Q9H1E3 243 aaKnown RBP26.98■■□□□ 1.91
CPSF6-205ENST00000550075 TMEM51Q9NW97 253 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 SLC12A6Q9UHW9 1150 aa26.98■■□□□ 1.91
CPSF6-205ENST00000550075 TYW5A2RUC4 315 aaKnown RBP26.97■■□□□ 1.91
CPSF6-205ENST00000550075 TBC1D3BA6NDS4 549 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 GOLGA8SH3BPF8 625 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 PLA2G5P39877 138 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 MATKP42679 507 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 DGKGP49619 791 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 NRLP54845 237 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 SATB1Q01826 763 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 MTA1Q13330 715 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 FYB2Q5VWT5 728 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms