RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 LRRC19Q9H756 370 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
CACNB3-213ENST00000550064 AMACRQ9UHK6 382 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
CACNB3-213ENST00000550064 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF487B1APH4 448 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 H0YGN5 161 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 MSI1O43347 362 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 TBX18O95935 607 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 KCNJ1P48048 391 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 DYNLT1P63172 113 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 EFEMP1Q12805 493 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 TFDP2Q14188 446 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 ARL13BQ3SXY8 428 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 C10orf120Q5SQS8 335 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 SNX30Q5VWJ9 437 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 CCDC137Q6PK04 289 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 PQLC3Q8N755 202 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 PCDH19Q8TAB3 1148 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 PSMG2Q969U7 264 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 FAF2Q96CS3 445 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 TRMT2BQ96GJ1 504 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 HINFPQ9BQA5 517 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF670Q9BS34 389 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 TKTL2Q9H0I9 626 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 NKX2-4Q9H2Z4 354 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 CCSER2Q9H7U1 834 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 OLA1Q9NTK5 396 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 ARHGEF38Q9NXL2 777 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 CWC15Q9P013 229 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 PCYOX1Q9UHG3 505 aa12.58□□□□□ -0.4
CACNB3-213ENST00000550064 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF840PA6NDX5 716 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FAM72CH0Y354 149 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 H3BNC9 293 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 TTI1O43156 1089 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 GLUD1P00367 558 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 C8AP07357 584 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 GOT1P17174 413 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 CCR1P32246 355 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FNTAP49354 379 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 TBX4P57082 545 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 DR1Q01658 176 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 BRMS1LQ5PSV4 323 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FAM72AQ5TYM5 149 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 SLC9A4Q6AI14 798 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FAM72DQ6L9T8 149 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 CCDC149Q6ZUS6 474 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 ITIH5Q86UX2 942 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FAM72BQ86X60 149 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF276Q8N554 614 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-213ENST00000550064 HAUS1Q96CS2 278 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FCRL2Q96LA5 508 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-213ENST00000550064 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 CSPG4P5Q96PW8 444 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 CERS4Q9HA82 394 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF334Q9HCZ1 680 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-213ENST00000550064 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 MARCH2Q9P0N8 246 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 RCOR3Q9P2K3 495 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-213ENST00000550064 SAE1Q9UBE0 346 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-213ENST00000550064 MSRAQ9UJ68 235 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 ASB3Q9Y575 518 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 SNX10Q9Y5X0 201 aa12.57□□□□□ -0.4
CACNB3-213ENST00000550064 FAM187AA6NFU0 413 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 KCNU1A8MYU2 1149 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 H3BRJ5 948 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 APOL1O14791 398 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 LIASO43766 372 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 CREB3O43889 395 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 TLR5O60602 858 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 PAGE1O75459 146 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 ZMYND10O75800 440 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 HEXIM1O94992 359 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 LRG1P02750 347 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 PECAM1P16284 738 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 AMPD1P23109 780 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 ARL4AP40617 200 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 CLCN4P51793 760 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 OTUD4Q01804 1114 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 SEMA3BQ13214 749 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 DHX34Q14147 1143 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms