RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 RIN3Q8TB24 985 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CASP10Q92851 521 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 UBE2E3Q969T4 207 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 TMA16Q96EY4 203 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CAPNS2Q96L46 248 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CPNE1Q99829 537 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 AKAP7Q9P0M2 348 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 RRP15Q9Y3B9 282 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 A0A087X1B8 175 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 EVPLLA8MZ36 301 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 USP17L7P0C7H9 530 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CHRM3P20309 590 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 SNRPD1P62314 119 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CNTN1Q12860 1018 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CAMK2GQ13555 558 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 HIC1Q14526 733 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ZACNQ401N2 412 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 PSRC1Q6PGN9 363 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 E2F7Q96AV8 911 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 DNAJC19Q96DA6 116 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 MBOAT7Q96N66 472 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ILKAPQ9H0C8 392 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 NMRAL1Q9HBL8 299 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC39A10Q9ULF5 831 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 DYTNA2CJ06 578 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CHADO15335 359 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 GUCY1B2O75343 617 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CYP1A1P04798 512 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 RANBP1P43487 201 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 MTF1Q14872 753 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 DENND5BQ6ZUT9 1274 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 DEFB128Q7Z7B8 93 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 STX19Q8N4C7 294 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 TNFRSF25Q93038 417 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ACSF2Q96CM8 615 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 AGAP3Q96P47 875 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 CHMP2BQ9UQN3 213 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 SNX5Q9Y5X3 404 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 GRAP2O75791 330 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM107AO95990 144 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 TPBGLP0DKB5 382 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 TNFRSF8P28908 595 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 HSPA13P48723 471 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 FUT2Q10981 343 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 NT5DC3Q86UY8 548 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 REXO1L1PQ8IX06 675 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 QRFPRQ96P65 431 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 TMEM237Q96Q45 408 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC13A1Q9BZW2 595 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 GPR88Q9GZN0 384 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SENP6Q9GZR1 1112 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ATXN3LQ9H3M9 355 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ATP13A1Q9HD20 1204 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM105AQ9NUU6 356 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 USP15Q9Y4E8 981 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 CFLARO15519 480 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 GLUD2P49448 558 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SGCGQ13326 291 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 PDCLQ13371 301 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ZNF655Q8N720 491 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SHC3Q92529 594 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 VPS50Q96JG6 964 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 KIF17Q9P2E2 1029 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 APPL1Q9UKG1 709 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM32AQ9Y421 112 aaKnown RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 RPS6KL1Q9Y6S9 549 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 YDJCA8MPS7 323 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 C2CD2LO14523 706 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 POMCP01189 267 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 FGFR4P22455 802 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 POLD2P49005 469 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 MSLNQ13421 630 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 LLGL1Q15334 1064 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 PRMT9Q6P2P2 845 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ANKMY2Q8IV38 441 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ATL1Q8WXF7 558 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 TMEM175Q9BSA9 504 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 MPP6Q9NZW5 540 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 MARCH2Q9P0N8 246 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 AFF4Q9UHB7 1163 aaKnown RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 CLCA2Q9UQC9 943 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 DNALI1O14645 258 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 CSPG5O95196 566 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SYF2O95926 243 aaKnown RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ADH1CP00326 375 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 MSH3P20585 1137 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ARL2P36404 184 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 FLT3LGP49771 235 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ATN1P54259 1190 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 BCL2L1Q07817 233 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 PCSK7Q16549 785 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC39A12Q504Y0 691 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC25A41Q8N5S1 370 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 TIFAQ96CG3 184 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 MAML3Q96JK9 1138 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms