RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 CDH5P33151 784 aaPredicted RBP9.09□□□□□ -0.95
SP1-203ENST00000548560 GJA4P35212 333 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 RPL34P49207 117 aaKnown RBP9.09□□□□□ -0.95
SP1-203ENST00000548560 HARS2P49590 506 aaKnown RBP9.09□□□□□ -0.95
SP1-203ENST00000548560 ZNF445P59923 1031 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
SP1-203ENST00000548560 CDR2Q01850 454 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 NR1I3Q14994 352 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 PON2Q15165 354 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 ASIC2Q16515 512 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 PTPRNQ16849 979 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 PTPN20Q4JDL3 420 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 EFHC1Q5JVL4 640 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 OR6B2Q6IFH4 312 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 MSANTD2Q6P1R3 559 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 FAM183BPQ6ZVS7 135 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 BHLHA9Q7RTU4 235 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 TMEM110Q86TL2 294 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 ERICH1Q86X53 443 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 ZDHHC17Q8IUH5 632 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 BBS7Q8IWZ6 715 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 SCUBE3Q8IX30 993 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 CCDC105Q8IYK2 499 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 TMEM105Q8N8V8 129 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 IQCDQ96DY2 449 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 NAP1L5Q96NT1 182 aaPredicted RBP9.09□□□□□ -0.95
SP1-203ENST00000548560 SERPINB11Q96P15 392 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 CPXM1Q96SM3 734 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 NUP58Q9BVL2 599 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 LINC00597Q9H2U6 94 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 POPDC2Q9HBU9 364 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 IFNKQ9P0W0 207 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 CYTH4Q9UIA0 394 aa9.09□□□□□ -0.95
SP1-203ENST00000548560 HBS1LQ9Y450 684 aaKnown RBP9.09□□□□□ -0.95
SP1-203ENST00000548560 F5P12259 2224 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 ERBB2P04626 1255 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 GLI1P08151 1106 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 ADH5P11766 374 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 CHKAP35790 457 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 NSFP46459 744 aaKnown RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 YWHAZP63104 245 aaKnown RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 NOMO3P69849 1222 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 GAD2Q05329 585 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 GRSF1Q12849 480 aaKnown RBP eCLIP9.08□□□□□ -0.96
SP1-203ENST00000548560 DHCR24Q15392 516 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 ANO4Q32M45 955 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 PREPLQ4J6C6 727 aaPredicted RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 DGKKQ5KSL6 1271 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 SFMBT2Q5VUG0 894 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 NUGGCQ68CJ6 796 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 BRICD5Q6PL45 260 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 HTR3DQ70Z44 454 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 BEND5Q7L4P6 421 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 DENND1CQ8IV53 801 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 ZNF397Q8NF99 534 aaPredicted RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 SLC20A1Q8WUM9 679 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 DDX1Q92499 740 aaKnown RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 CD101Q93033 1021 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 C18orf8Q96DM3 657 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 P2RY13Q9BPV8 354 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 NUCKS1Q9H1E3 243 aaKnown RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 KCNH6Q9H252 994 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 SPHK2Q9NRA0 654 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 ASNSD1Q9NWL6 643 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
SP1-203ENST00000548560 TSR3Q9UJK0 312 aaKnown RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 NOCTQ9UK39 431 aaKnown RBP9.08□□□□□ -0.96
SP1-203ENST00000548560 OTOL1A6NHN0 477 aaPredicted RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 NEDD8-MDP1E9PL57 170 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 TRDMT1O14717 391 aaKnown RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 MSI1O43347 362 aaKnown RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 PI15O43692 258 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 DAB1O75553 588 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 APOEP02649 317 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 CYBBP04839 570 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 TPM1P09493 284 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 DRD1P21728 446 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 GBP1P32455 592 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 EIF2DP41214 584 aaKnown RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 RPS9P46781 194 aaKnown RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 TBX4P57082 545 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 CDK17Q00537 523 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 FMO1Q01740 532 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 SLC6A3Q01959 620 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 NHLH1Q02575 133 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 NNTQ13423 1086 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 TRIP4Q15650 581 aaPredicted RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 DCAF6Q58WW2 860 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 FIGNQ5HY92 759 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 LY6G5CQ5SRR4 150 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 FAM102AQ5T9C2 384 aaPredicted RBP9.07□□□□□ -0.96
SP1-203ENST00000548560 PPP1R2P3Q6NXS1 205 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 TXNDC11Q6PKC3 985 aa9.07□□□□□ -0.96
SP1-203ENST00000548560 TPGS1Q6ZTW0 290 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms