RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SRSF1Q07955 248 aaKnown RBP eCLIP9.75□□□□□ -0.85
SSH1-205ENST00000546812 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 DNAJC3Q13217 504 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 E2F5Q15329 346 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 DUOXA2Q1HG44 320 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 L1TD1Q5T7N2 865 aaKnown RBP9.75□□□□□ -0.85
SSH1-205ENST00000546812 FBXL19Q6PCT2 694 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 SHC4Q6S5L8 630 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 LAYNQ6UX15 382 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 SFR1Q86XK3 245 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 CACTIN-AS1Q8N1I8 211 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 UCMAQ8WVF2 138 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 BHMTQ93088 406 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 BIRC7Q96CA5 298 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 P2RY11Q96G91 374 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 CNDP2Q96KP4 475 aaKnown RBP9.75□□□□□ -0.85
SSH1-205ENST00000546812 PLK2Q9NYY3 685 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 LSM7Q9UK45 103 aaKnown RBP9.75□□□□□ -0.85
SSH1-205ENST00000546812 PCDHA7Q9UN72 937 aa9.75□□□□□ -0.85
SSH1-205ENST00000546812 CBX4O00257 560 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 VILLO15195 856 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 TSPAN3O60637 253 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 PENKP01210 267 aaPredicted RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 EPHX1P07099 455 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 C7P10643 843 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 ATP5C1P36542 298 aaKnown RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 TXLNAP40222 546 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 ACADVLP49748 655 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 MFAP3P55082 362 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 UCNP55089 124 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 ILKQ13418 452 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 ZNF234Q14588 700 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 GEN1Q17RS7 908 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 TBC1D25Q3MII6 688 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 ADAT2Q7Z6V5 191 aaKnown RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 CACUL1Q86Y37 369 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 GATAD2AQ86YP4 633 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 B3GALNT2Q8NCR0 500 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 OR2T3Q8NH03 318 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 TSC1Q92574 1164 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 LARP4BQ92615 738 aaKnown RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 ELF4Q99607 663 aaPredicted RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 ARID3AQ99856 593 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 CBWD1Q9BRT8 395 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 DMAP1Q9NPF5 467 aaPredicted RBP9.74□□□□□ -0.85
SSH1-205ENST00000546812 ELOVL2Q9NXB9 296 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 SEL1LQ9UBV2 794 aa9.74□□□□□ -0.85
SSH1-205ENST00000546812 A0A087X0B3 334 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 A8MXQ7 604 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 SLC28A2O43868 658 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 PRPF6O94906 941 aaKnown RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 FSBPO95073 299 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 SEMA4FO95754 770 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 ITGAVP06756 1048 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 GLDCP23378 1020 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 PRKCHP24723 683 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 CSRP3P50461 194 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 BCAT1P54687 386 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 C21orf59P57076 290 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 TMPRSS3P57727 454 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 LY6DQ14210 128 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 SURF1Q15526 300 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 PRAMEF14Q5SWL7 426 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 BROXQ5VW32 411 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 RESP18Q5W5W9 173 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 Q6ZNB5 142 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 PAQR9Q6ZVX9 377 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 TRAPPC11Q7Z392 1133 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 SYCP3Q8IZU3 236 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 GPD1LQ8N335 351 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 RBBP8NLQ8NC74 664 aaPredicted RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 ZNF248Q8NDW4 579 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 SAP25Q8TEE9 199 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 RFFLQ8WZ73 363 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 TTC9Q92623 222 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 PIWIL1Q96J94 861 aaKnown RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 LGMNQ99538 433 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 ORAI3Q9BRQ5 295 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 ACE2Q9BYF1 805 aaPredicted RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 BTBD1Q9H0C5 482 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 LHX5Q9H2C1 402 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 FBXO44Q9H4M3 255 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 PCIF1Q9H4Z3 704 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 TLR8Q9NR97 1041 aaKnown RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 PCDHB13Q9Y5F0 798 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 USP9XQ93008 2570 aaPredicted RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
SSH1-205ENST00000546812 MUC22E2RYF6 1773 aaPredicted RBP9.73□□□□□ -0.85
SSH1-205ENST00000546812 ZNF233A6NK53 670 aa9.72□□□□□ -0.85
SSH1-205ENST00000546812 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
SSH1-205ENST00000546812 TIMM44O43615 452 aa9.72□□□□□ -0.85
SSH1-205ENST00000546812 GCNT3O95395 438 aa9.72□□□□□ -0.85
SSH1-205ENST00000546812 PFKFB1P16118 471 aa9.72□□□□□ -0.85
SSH1-205ENST00000546812 GAP43P17677 238 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms