RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 TGM2P21980 687 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 VCPP55072 806 aaKnown RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 BRMS1LQ5PSV4 323 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 MSANTD2Q6P1R3 559 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 TMC7Q7Z402 723 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 PYROXD2Q8N2H3 581 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 PCDH19Q8TAB3 1148 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 ACTL9Q8TC94 416 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 P3H4Q92791 437 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 CASP10Q92851 521 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 CSPG4P5Q96PW8 444 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 TKTL2Q9H0I9 626 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 DPH5Q9H2P9 285 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 PRDM16Q9HAZ2 1276 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 SFMBT1Q9UHJ3 866 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 ZNF148Q9UQR1 794 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 LZTS1Q9Y250 596 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 DRG1Q9Y295 367 aaKnown RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 YIPF1Q9Y548 306 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 CXCL14O95715 111 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 RARGP13631 454 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 CARSP49589 748 aaKnown RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 RBM10P98175 930 aaKnown RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 VEPH1Q14D04 833 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 TAF12Q16514 161 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 DUPD1Q68J44 220 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 SLC9A4Q6AI14 798 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 GSTA5Q7RTV2 222 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 TCEAL8Q8IYN2 117 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 EIF1ADQ8N9N8 165 aaKnown RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 PDZD8Q8NEN9 1154 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 SLC35B2Q8TB61 432 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 SEC14L1Q92503 715 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 NKD2Q969F2 451 aaPredicted RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 MAGEB5Q9BZ81 275 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 TRIM31Q9BZY9 425 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 TMPRSS4Q9NRS4 437 aa20.17■□□□□ 0.82
SKP2-208ENST00000546211 CWC15Q9P013 229 aaKnown RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 SAE1Q9UBE0 346 aaPredicted RBP20.17■□□□□ 0.82
SKP2-208ENST00000546211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.16■□□□□ 0.82
SKP2-208ENST00000546211 MCF2LO15068 1137 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 DAPK3O43293 454 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 MYBL2P10244 700 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 GOT1P17174 413 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 CCR1P32246 355 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 ZNF135P52742 658 aaPredicted RBP20.16■□□□□ 0.82
SKP2-208ENST00000546211 EIF4EBP2Q13542 120 aaPredicted RBP20.16■□□□□ 0.82
SKP2-208ENST00000546211 HLTFQ14527 1009 aaKnown RBP eCLIP20.16■□□□□ 0.82
SKP2-208ENST00000546211 GSPT2Q8IYD1 628 aaKnown RBP20.16■□□□□ 0.82
SKP2-208ENST00000546211 PQLC3Q8N755 202 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.16■□□□□ 0.82
SKP2-208ENST00000546211 OVCA2Q8WZ82 227 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 UBE2OQ9C0C9 1292 aaKnown RBP20.16■□□□□ 0.82
SKP2-208ENST00000546211 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.16■□□□□ 0.82
SKP2-208ENST00000546211 NUDT5Q9UKK9 219 aa20.16■□□□□ 0.82
SKP2-208ENST00000546211 LINC01553A4QN01 128 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 EEF2KO00418 725 aaKnown RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 CREB3O43889 395 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 ITGAVP06756 1048 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 CNPP09543 421 aaKnown RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 PECAM1P16284 738 aaPredicted RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 DRG2P55039 364 aaKnown RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 EIF3EP60228 445 aaKnown RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 PTK6Q13882 451 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 OASLQ15646 514 aaKnown RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 BEND6Q5SZJ8 279 aaPredicted RBP20.15■□□□□ 0.82
SKP2-208ENST00000546211 C1orf228Q6PIY5 440 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 PLD5Q8N7P1 536 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 ENTPD7Q9NQZ7 604 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 ARHGEF38Q9NXL2 777 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 NFU1Q9UMS0 254 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 NR2E3Q9Y5X4 410 aa20.15■□□□□ 0.82
SKP2-208ENST00000546211 MSI1O43347 362 aaKnown RBP20.14■□□□□ 0.81
SKP2-208ENST00000546211 SEC31AO94979 1220 aaKnown RBP20.14■□□□□ 0.81
SKP2-208ENST00000546211 ADH1AP07327 375 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 ZDHHC11BP0C7U3 371 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 PPP2R5DQ14738 602 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 NOMO1Q15155 1222 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 TRADDQ15628 312 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 C10orf120Q5SQS8 335 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 NPNTQ6UXI9 565 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 DDX42Q86XP3 938 aaKnown RBP eCLIP20.14■□□□□ 0.81
SKP2-208ENST00000546211 ABHD8Q96I13 439 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 CDK5RAP1Q96SZ6 601 aaKnown RBP20.14■□□□□ 0.81
SKP2-208ENST00000546211 TCF25Q9BQ70 676 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 EMILIN2Q9BXX0 1053 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 ALG13Q9NP73 1137 aaKnown RBP20.14■□□□□ 0.81
SKP2-208ENST00000546211 ANLNQ9NQW6 1124 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 ASIC3Q9UHC3 531 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 TLR6Q9Y2C9 796 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 SNX24Q9Y343 169 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 INSL5Q9Y5Q6 135 aa20.14■□□□□ 0.81
SKP2-208ENST00000546211 SLC2A3P11169 496 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 AMPD1P23109 780 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 EPHB3P54753 998 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 TWF1Q12792 350 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 EFEMP1Q12805 493 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 PLD1Q13393 1074 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 NNTQ13423 1086 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 KCTD19Q17RG1 926 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms