RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 LZTFL1Q9NQ48 299 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 PIGVQ9NUD9 493 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 OBP2AQ9NY56 170 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 PYCARDQ9ULZ3 195 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 GUCA1BQ9UMX6 200 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 TMEM110-MUSTN1A8MSY1 372 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 LEFTY2O00292 366 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 PROSCO94903 275 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 ENDOD1O94919 500 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 IL9P15248 144 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 TFE3P19532 575 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 MAN1A1P33908 653 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 SSR1P43307 286 aaKnown RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 ZNF252P-AS1Q0IIN9 211 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 USP4Q13107 963 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 MTA1Q13330 715 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 ARL13BQ3SXY8 428 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 C11orf63Q6NUN7 778 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 BNIPLQ7Z465 357 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 RNF10Q8N5U6 811 aaKnown RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 ZFRQ96KR1 1074 aaKnown RBP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 DCLK3Q9C098 648 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 WDCPQ9H6R7 721 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 GKN1Q9NS71 199 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDCA3-210ENST00000545368 CFAP97Q9P2B7 532 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 TRIM10Q9UDY6 481 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 SLC12A6Q9UHW9 1150 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 CCL26Q9Y258 94 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 DUSP10Q9Y6W6 482 aa13.52□□□□□ -0.25
CDCA3-210ENST00000545368 A0A0U1RQJ8 604 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 GOLGA6L9A6NEM1 432 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 C2CD4DB7Z1M9 353 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 STC2O76061 302 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 IGLV3-27P01718 113 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 CORO1AP31146 461 aaKnown RBP13.51□□□□□ -0.25
CDCA3-210ENST00000545368 SLC1A1P43005 524 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 HDAC4P56524 1084 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 EIF4EBP2Q13542 120 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-210ENST00000545368 PPP2R5DQ14738 602 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ZNF77Q15935 545 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 SH3PXD2AQ5TCZ1 1133 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 CC2D1AQ6P1N0 951 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-210ENST00000545368 SCYL2Q6P3W7 929 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 POTEHQ6S545 545 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 DAAM2Q86T65 1068 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 FAM131BQ86XD5 332 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ATP6V0D2Q8N8Y2 350 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 BPIFB1Q8TDL5 484 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ATXN2LQ8WWM7 1075 aaKnown RBP13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ATRIPQ8WXE1 791 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ELSPBP1Q96BH3 223 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 SLC39A13Q96H72 371 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 FCRL2Q96LA5 508 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ALS2CR12Q96Q35 445 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 CALCOCO1Q9P1Z2 691 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 ZNF510Q9Y2H8 683 aa13.51□□□□□ -0.25
CDCA3-210ENST00000545368 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 HEPACAM2A8MVW5 462 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 SPOPO43791 374 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 PRPSAP2O60256 369 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 BUB1BO60566 1050 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 LRCH4O75427 683 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 ECI2O75521 394 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 MOCS3O95396 460 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 LATS1O95835 1130 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 MOCS2O96007 188 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 FCARP24071 287 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 PCK1P35558 622 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 VIPR2P41587 438 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 SLC11A2P49281 568 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 CXCR3P49682 368 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 KCNQ1P51787 676 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 ATXN1P54253 815 aaKnown RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 AIF1P55008 147 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 HADHQ16836 314 aaKnown RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 ZC3H12AQ5D1E8 599 aaKnown RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 YAF2Q8IY57 180 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 ZDHHC14Q8IZN3 488 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 CCAR2Q8N163 923 aaKnown RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 KIAA1958Q8N8K9 716 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 DEPDC1BQ8WUY9 529 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 BTN2A3PQ96KV6 586 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 ADAM33Q9BZ11 813 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 TKTL2Q9H0I9 626 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 THG1LQ9NWX6 298 aaKnown RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 TRMT1Q9NXH9 659 aaKnown RBP13.5□□□□□ -0.25
CDCA3-210ENST00000545368 ARHGEF38Q9NXL2 777 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 SALL4Q9UJQ4 1053 aa13.5□□□□□ -0.25
CDCA3-210ENST00000545368 SLC9A3R1O14745 358 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-210ENST00000545368 MIPP30301 263 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms