RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 TRIM6Q9C030 488 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-215ENST00000544909 PLAC1Q9HBJ0 212 aa12.88□□□□□ -0.35
PAAF1-215ENST00000544909 SNTG2Q9NY99 539 aa12.88□□□□□ -0.35
PAAF1-215ENST00000544909 RRN3Q9NYV6 651 aa12.88□□□□□ -0.35
PAAF1-215ENST00000544909 DTLQ9NZJ0 730 aa12.88□□□□□ -0.35
PAAF1-215ENST00000544909 HAO1Q9UJM8 370 aa12.88□□□□□ -0.35
PAAF1-215ENST00000544909 SCN1AP35498 2009 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 AP3B1O00203 1094 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 CSDE1O75534 798 aaKnown RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 GRAP2O75791 330 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 RECQL4O94761 1208 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 FBXO21O94952 628 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 MYL4P12829 197 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 DNAJB2P25686 324 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 LRPAP1P30533 357 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 NOS2P35228 1153 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 HCAR3P49019 387 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 FKBP1BP68106 108 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 OCRLQ01968 901 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 SCAPQ12770 1279 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 CA9Q16790 459 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 NCBP2-AS2Q69YL0 99 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 KCNT2Q6UVM3 1135 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 PTPRN2Q92932 1015 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 NTAN1Q96AB6 310 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 ZBTB10Q96DT7 871 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 CFAP36Q96G28 342 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
PAAF1-215ENST00000544909 KCNK13Q9HB14 408 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 IGSF9Q9P2J2 1179 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 KANSL3Q9P2N6 904 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
PAAF1-215ENST00000544909 SDR42E2A6NKP2 422 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 GLRA3O75311 464 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 GABBR2O75899 941 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 NEFHP12036 1026 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 SMPD1P17405 629 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 PGAM1P18669 254 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 PAFAH1B3Q15102 231 aaKnown RBP12.86□□□□□ -0.35
PAAF1-215ENST00000544909 TEX44Q53QW1 395 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
PAAF1-215ENST00000544909 NME8Q8N427 588 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 CCDC110Q8TBZ0 833 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 ISL2Q96A47 359 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 E2F7Q96AV8 911 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 OXNAD1Q96HP4 312 aaPredicted RBP12.86□□□□□ -0.35
PAAF1-215ENST00000544909 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 FAM49BQ9NUQ9 324 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 THAP1Q9NVV9 213 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 RNF181Q9P0P0 153 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 HEY2Q9UBP5 337 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 TUBGCP4Q9UGJ1 667 aa12.86□□□□□ -0.35
PAAF1-215ENST00000544909 A0A0G2JND7 137 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 C9IYK1 514 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GOLGA8RI6L899 631 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 PDHXO00330 501 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 HUS1O60921 280 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 PEX11AO75192 247 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 BPGMP07738 259 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 EPHX2P34913 555 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GJA5P36382 358 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GJA9P57773 515 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ADAM17P78536 824 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GBE1Q04446 702 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ZBTB16Q05516 673 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ZNF33AQ06730 810 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 KIZQ2M2Z5 673 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 PRPF39Q86UA1 669 aaKnown RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 CRLF3Q8IUI8 442 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 PGAP3Q96FM1 320 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 SLC2A13Q96QE2 648 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 PARK7Q99497 189 aaKnown RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 DUSP16Q9BY84 665 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 C1orf21Q9H246 121 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ADAM28Q9UKQ2 775 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 TRIM33Q9UPN9 1127 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 LRRC42Q9Y546 428 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 NME7Q9Y5B8 376 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 SCN4AP35499 1836 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 SMIM28A0A1B0GU29 152 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 MAGEC1O60732 1142 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms