RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MYL12BO14950 172 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 GTF2E2P29084 291 aaKnown RBP15.83■□□□□ 0.13
CHD4-210ENST00000544040 PDK2Q15119 407 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 NRF1Q16656 503 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 CELF6Q96J87 481 aaKnown RBP15.83■□□□□ 0.13
CHD4-210ENST00000544040 PDGFCQ9NRA1 345 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 MYRFQ9Y2G1 1151 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.13
CHD4-210ENST00000544040 CBX6O95503 412 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 GRK3P35626 688 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 SP8Q8IXZ3 490 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 CDK20Q8IZL9 346 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 TRIM63Q969Q1 353 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 SLC9A8Q9Y2E8 581 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 EFCAB10A6NFE3 127 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 RRM1P23921 792 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 ARF5P84085 180 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 TAF1CQ15572 869 aaPredicted RBP15.83■□□□□ 0.12
CHD4-210ENST00000544040 IFNLR1Q8IU57 520 aaPredicted RBP15.83■□□□□ 0.12
CHD4-210ENST00000544040 DENND6AQ8IWF6 608 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 SLCO1B7G3V0H7 640 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 FCHO1O14526 889 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 TCP10LQ8TDR4 215 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 FRMD8P1Q9BZ68 369 aaPredicted RBP15.83■□□□□ 0.12
CHD4-210ENST00000544040 TRIM39Q9HCM9 518 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 NDUFAF1Q9Y375 327 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.83■□□□□ 0.12
CHD4-210ENST00000544040 CBX4O00257 560 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 RIPK2O43353 540 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 ITGALP20701 1170 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 SNRPFP62306 86 aaKnown RBP15.83■□□□□ 0.12
CHD4-210ENST00000544040 GRB10Q13322 594 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 POMGNT2Q8NAT1 580 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 SERAC1Q96JX3 654 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 TBCDQ9BTW9 1192 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 BDH2Q9BUT1 245 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
CHD4-210ENST00000544040 FAM47E-STBD1D6RA91 191 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TNFAIP8O95379 198 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TSC22D1Q15714 1073 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 CCNJLQ8IV13 435 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TBC1D16Q8TBP0 767 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MID1IP1Q9NPA3 183 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 VPS28Q9UK41 221 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MSH4O15457 936 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 CRTAMO95727 393 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TPBGLP0DKB5 382 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TNNI3P19429 210 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 RASA1P20936 1047 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 ACAP1Q15027 740 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MTSS1LQ765P7 747 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 LOC100506127A0A0U1RQW1 187 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 DYRK3O43781 588 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 GRK4P32298 578 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MAPKAPK2P49137 400 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 ACTRT1Q8TDG2 376 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 PYDC1Q8WXC3 89 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 ADI1Q9BV57 179 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 CCDC167Q9P0B6 97 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TDRKHQ9Y2W6 561 aaKnown RBP15.82■□□□□ 0.12
CHD4-210ENST00000544040 CYB561D2O14569 222 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 HBP1O60381 514 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MED24O75448 989 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MYL12AP19105 171 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 CYP2F1P24903 491 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 PNPLA4P41247 253 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 RHOAP61586 193 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 WASHC2DQ5SRD0 308 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 EHD3Q9NZN3 535 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 PSMD11O00231 422 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 MPOP05164 745 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 CYP2C8P10632 490 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 SLC2A3P11169 496 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 PAICSP22234 425 aaKnown RBP15.82■□□□□ 0.12
CHD4-210ENST00000544040 CNTFP26441 200 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 SPANXN2Q5MJ10 180 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 TMPRSS6Q8IU80 811 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 ADGRF2Q8IZF7 708 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 LPCAT1Q8NF37 534 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 EXD1Q8NHP7 514 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 APOL4Q9BPW4 351 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 CBWD1Q9BRT8 395 aa15.82■□□□□ 0.12
CHD4-210ENST00000544040 SEC22BO75396 215 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 CNPP09543 421 aaKnown RBP15.81■□□□□ 0.12
CHD4-210ENST00000544040 PKNOX1P55347 436 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 ZNF544Q6NX49 715 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 SLC22A9Q8IVM8 553 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 ANKZF1Q9H8Y5 726 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 ZSCAN5CA6NGD5 496 aaPredicted RBP15.81■□□□□ 0.12
CHD4-210ENST00000544040 LDLRP01130 860 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 VTNP04004 478 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 SCNN1BP51168 640 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 ZNF571Q7Z3V5 609 aaPredicted RBP15.81■□□□□ 0.12
CHD4-210ENST00000544040 MARK4Q96L34 752 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms