RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 HESX1Q9UBX0 185 aa12.62□□□□□ -0.39
PTPN6-220ENST00000543115 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
PTPN6-220ENST00000543115 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
PTPN6-220ENST00000543115 TNRC6BQ9UPQ9 1833 aaKnown RBP12.62□□□□□ -0.39
PTPN6-220ENST00000543115 CNOT1A5YKK6 2376 aaKnown RBP12.62□□□□□ -0.39
PTPN6-220ENST00000543115 THADAQ6YHU6 1953 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 GFRA2O00451 464 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 PIK3R2O00459 728 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 PSMA7O14818 248 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 AP5Z1O43299 807 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 ENGP17813 658 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 TBXAS1P24557 533 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 MAPK8P45983 427 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 DAOAP59103 153 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 YWHAEP62258 255 aaKnown RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 ZNF33AQ06730 810 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 ENPP2Q13822 863 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 UAP1L1Q3KQV9 507 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 FUT11Q495W5 492 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 SH3PXD2AQ5TCZ1 1133 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 BSPRYQ5W0U4 402 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 SLC23A3Q6PIS1 610 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 TMEM270Q6UE05 265 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 SLC36A4Q6YBV0 504 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 PPM1KQ8N3J5 372 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 RBBP8NLQ8NC74 664 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 SLC35F5Q8WV83 523 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 NUSAP1Q9BXS6 441 aaKnown RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 METTL14Q9HCE5 456 aaKnown RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
PTPN6-220ENST00000543115 ANGPTL2Q9UKU9 493 aa12.61□□□□□ -0.39
PTPN6-220ENST00000543115 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 PMM2O15305 246 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 MSI1O43347 362 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 TSPAN3O60637 253 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 GADD45BO75293 160 aaPredicted RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 ZNF217O75362 1048 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 KRT37O76014 449 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 CFIP05156 583 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 PAEPP09466 180 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 LCP1P13796 627 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 RGS7P49802 495 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 LMAN2Q12907 356 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 STIM1Q13586 685 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 CCDC40Q4G0X9 1142 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 PMF1Q6P1K2 205 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 LCLAT1Q6UWP7 414 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 KIAA1324Q6UXG2 1013 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 ANKS1BQ7Z6G8 1248 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 ARHGEF19Q8IW93 802 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 ELOA2Q8IYF1 753 aaPredicted RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 SIX6OS1Q8N1H7 587 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 DDI1Q8WTU0 396 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 HSPA12BQ96MM6 686 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 GTPBP4Q9BZE4 634 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 MKRN2Q9H000 416 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 OLA1Q9NTK5 396 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 ELOVL2Q9NXB9 296 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 HBS1LQ9Y450 684 aaKnown RBP12.6□□□□□ -0.39
PTPN6-220ENST00000543115 PCDHB4Q9Y5E5 795 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 CACNA1GO43497 2377 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 NUP205Q92621 2012 aa12.6□□□□□ -0.39
PTPN6-220ENST00000543115 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 BIN1O00499 593 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
PTPN6-220ENST00000543115 CYBBP04839 570 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 PRKCHP24723 683 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 HLA-FP30511 346 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 SGSHP51688 502 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 STX17P56962 302 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 SHC2P98077 582 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 ZNF252P-AS1Q0IIN9 211 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 MORC3Q14149 939 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 ZNF234Q14588 700 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 RRAGAQ7L523 313 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 SCML4Q8N228 414 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 DEFB124Q8NES8 71 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 RNF139Q8WU17 664 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 CAPN10Q9HC96 672 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 CNGB3Q9NQW8 809 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 ABCC13Q9NSE7 274 aa12.59□□□□□ -0.39
PTPN6-220ENST00000543115 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms