RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CCDC134Q9H6E4 229 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 CXorf36Q9H7Y0 433 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 GBA2Q9HCG7 927 aaPredicted RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF215Q9UL58 517 aaPredicted RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 MRPS17Q9Y2R5 130 aaKnown RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 USP15Q9Y4E8 981 aaPredicted RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 MADDQ8WXG6 1647 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 WDR7Q9Y4E6 1490 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 UACAQ9BZF9 1416 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 PASKQ96RG2 1323 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 AGAP14A8MT82 685 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 PTGES3LE9PB15 166 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 VILLO15195 856 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TULP3O75386 442 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 STC2O76061 302 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CCNDBP1O95273 360 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 PGM3O95394 542 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 HSPA4LO95757 839 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 PRKAR1BP31321 381 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 ACSL1P33121 698 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 NNMTP40261 264 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 LIMS1P48059 325 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CAP1Q01518 475 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF844Q08AG5 666 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TBL3Q12788 808 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 LRMPQ12912 555 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 EPS8Q12929 822 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 PTP4A2Q12974 167 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 FHL3Q13643 280 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TBCCQ15814 346 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 DUSP28Q4G0W2 176 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 LRRC24Q50LG9 513 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CBWD5Q5RIA9 395 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CERCAMQ5T4B2 595 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 MCTP2Q6DN12 878 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 EFCAB12Q6NXP0 572 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TMEM108Q6UXF1 575 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 IKBIPQ70UQ0 350 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 DOK3Q7L591 496 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 PRPF39Q86UA1 669 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 GGNQ86UU5 652 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 GALNT13Q8IUC8 556 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC15A3Q8IY34 581 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TAGAPQ8N103 731 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 FSTL5Q8N475 847 aaPredicted RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 LSM14AQ8ND56 463 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 NSUN7Q8NE18 718 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 ZCCHC10Q8TBK6 192 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC2A12Q8TD20 617 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 VMP1Q96GC9 406 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 REXO5Q96IC2 774 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 INTS2Q9H0H0 1204 aaKnown RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TMEM168Q9H0V1 697 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 TAOK3Q9H2K8 898 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 MUC13Q9H3R2 512 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 RETREG1Q9H6L5 497 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 ZDHHC7Q9NXF8 308 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CHORDC1Q9UHD1 332 aaPredicted RBP4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 SUFUQ9UMX1 484 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 HDAC5Q9UQL6 1122 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 ZBTB1Q9Y2K1 713 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 KDM5BQ9UGL1 1544 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 IQSEC2Q5JU85 1478 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CD109Q6YHK3 1445 aa4.29□□□□□ -1.72
SFSWAP-211ENST00000542813 CCDC195A0A1B0GUA6 201 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 NPIPB15A6NHN6 443 aaPredicted RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PRR5-ARHGAP8B1AHC4 643 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 AGPSO00116 658 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CBFA2T3O75081 653 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ERAL1O75616 437 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 BEST1O76090 585 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 HEXIM1O94992 359 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PRSS23O95084 383 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CYP1A1P04798 512 aaPredicted RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 WEE2P0C1S8 567 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 NR2F1P10589 423 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 TGFB3P10600 412 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PRKCHP24723 683 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 RPL13P26373 211 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 TM4SF1P30408 202 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 HTR7P34969 479 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 HADHAP40939 763 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 GATMP50440 423 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PLIN5Q00G26 463 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 EFEMP1Q12805 493 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 NFYCQ13952 458 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CCNIQ14094 377 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF568Q3ZCX4 644 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 SPATS1Q496A3 300 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CCDC92Q53HC0 331 aaPredicted RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 GPR139Q6DWJ6 353 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 NAA16Q6N069 864 aaPredicted RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 DENND1BQ6P3S1 775 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CLEC9AQ6UXN8 241 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PIK3AP1Q6ZUJ8 805 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ZFPM1Q8IX07 1006 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms