RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 E2F7Q96AV8 911 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 ASB16Q96NS5 453 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 PHF7Q9BWX1 381 aaPredicted RBP24.04■■□□□ 1.44
HOMER3-205ENST00000542541 KCND1Q9NSA2 647 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 TMEM110-MUSTN1A8MSY1 372 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 BUB1BO60566 1050 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-205ENST00000542541 PCK1P35558 622 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 HARS2P49590 506 aaKnown RBP24.03■■□□□ 1.44
HOMER3-205ENST00000542541 PPP2R5DQ14738 602 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 OTUD1Q5VV17 481 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-205ENST00000542541 DAAM2Q86T65 1068 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 SYCE1Q8N0S2 351 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 SLC39A13Q96H72 371 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 ZFRQ96KR1 1074 aaKnown RBP24.03■■□□□ 1.44
HOMER3-205ENST00000542541 WDCPQ9H6R7 721 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 TRPV4Q9HBA0 871 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 GKN1Q9NS71 199 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 PIGVQ9NUD9 493 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 SLC12A6Q9UHW9 1150 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 ZKSCAN5Q9Y2L8 839 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 NR2E1Q9Y466 385 aa24.03■■□□□ 1.44
HOMER3-205ENST00000542541 MOCS3O95396 460 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 HMBSP08397 361 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 TCF3P15923 654 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 HDAC4P56524 1084 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 ARL13BQ3SXY8 428 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 BRMS1LQ5PSV4 323 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 CC2D1AQ6P1N0 951 aaPredicted RBP24.02■■□□□ 1.44
HOMER3-205ENST00000542541 POTEHQ6S545 545 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 ADAM33Q9BZ11 813 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 DCLK3Q9C098 648 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 SMG9Q9H0W8 520 aaKnown RBP24.02■■□□□ 1.44
HOMER3-205ENST00000542541 CALCOCO1Q9P1Z2 691 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 THEGQ9P2T0 379 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 EPS15L1Q9UBC2 864 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 LSM7Q9UK45 103 aaKnown RBP24.02■■□□□ 1.44
HOMER3-205ENST00000542541 ANAPC1Q9H1A4 1944 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 LEFTY2O00292 366 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 IGLV3-27P01718 113 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 APOEP02649 317 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 DEKP35659 375 aaKnown RBP24.02■■□□□ 1.44
HOMER3-205ENST00000542541 HADHQ16836 314 aaKnown RBP24.02■■□□□ 1.44
HOMER3-205ENST00000542541 ZC3H12AQ5D1E8 599 aaKnown RBP24.02■■□□□ 1.44
HOMER3-205ENST00000542541 SCYL2Q6P3W7 929 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 SH3RF2Q8TEC5 729 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 ALS2CR12Q96Q35 445 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 ZFP14Q9HCL3 533 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 OBP2AQ9NY56 170 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 SH3BP1Q9Y3L3 701 aa24.02■■□□□ 1.44
HOMER3-205ENST00000542541 OBSL1O75147 1896 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 DENND4CQ5VZ89 1909 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 PRPSAP2O60256 369 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 LRCH4O75427 683 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 STC2O76061 302 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 PRAMEF12O95522 483 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 TFF2Q03403 129 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 PLCD3Q8N3E9 789 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 TDRD5Q8NAT2 981 aaKnown RBP24.01■■□□□ 1.43
HOMER3-205ENST00000542541 UBE2Q2Q8WVN8 375 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 FCRL2Q96LA5 508 aaPredicted RBP24.01■■□□□ 1.43
HOMER3-205ENST00000542541 PRDM6Q9NQX0 595 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 CFAP97Q9P2B7 532 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 CCL26Q9Y258 94 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 ALG6Q9Y672 507 aa24.01■■□□□ 1.43
HOMER3-205ENST00000542541 IRF1P10914 325 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 MIPP30301 263 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 SSR1P43307 286 aaKnown RBP24■■□□□ 1.43
HOMER3-205ENST00000542541 KCNQ1P51787 676 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 AIF1P55008 147 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 MTSS1LQ765P7 747 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 FAM131BQ86XD5 332 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 ARFGAP1Q8N6T3 406 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 KIAA1958Q8N8K9 716 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 ATP6V0D2Q8N8Y2 350 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 USP18Q9UMW8 372 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 ZNF510Q9Y2H8 683 aa24■■□□□ 1.43
HOMER3-205ENST00000542541 E2F8A0AVK6 867 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 GRID2IPA4D2P6 1211 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 SPOPO43791 374 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 PALMO75781 387 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 ATXN1P54253 815 aaKnown RBP23.99■■□□□ 1.43
HOMER3-205ENST00000542541 ZXDBP98169 803 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 HTR3DQ70Z44 454 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 TTC16Q8NEE8 873 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 TRIM58Q8NG06 486 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 AZIN2Q96A70 460 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 BTN2A3PQ96KV6 586 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 TKTL2Q9H0I9 626 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 ARHGEF38Q9NXL2 777 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 C5orf42Q9H799 3197 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 USP27XA6NNY8 438 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 KCNU1A8MYU2 1149 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 KIF5CO60282 957 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 COMTP21964 271 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 ADRA1BP35368 520 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 SLC11A2P49281 568 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 RAB6CQ53S08 254 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 BOLA3Q53S33 107 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 ACBD5Q5T8D3 534 aaPredicted RBP23.99■■□□□ 1.43
HOMER3-205ENST00000542541 SLFN11Q7Z7L1 901 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms