RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RAB6CQ9H0N0 254 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ASCC2Q9H1I8 757 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 R3HDMLQ9H3Y0 253 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SMARCAD1Q9H4L7 1026 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PDZD7Q9H5P4 517 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 DCLRE1BQ9H816 532 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PCDH18Q9HCL0 1135 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ARHGEF4Q9NR80 690 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SMYD2Q9NRG4 433 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 KCNK4Q9NYG8 393 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 GTF2IRD1Q9UHL9 959 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ITGA11Q9UKX5 1188 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CORO1CQ9ULV4 474 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 BARX2Q9UMQ3 279 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PLLPQ9Y342 182 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 C2CD2Q9Y426 696 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 GJA3Q9Y6H8 435 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 A0A0G2JND7 137 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 HMX2A2RU54 273 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC15A5A6NIM6 579 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 FAM159BA6NKW6 160 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 CAPN14A8MX76 684 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 CXorf49A8MYA2 514 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TRIM49D1C9J1S8 452 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 E5RJQ4 531 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 H7C0C1 242 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 FCHO1O14526 889 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 APOL1O14791 398 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 KCNN4O15554 427 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 PRPSAP2O60256 369 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ENTPD5O75356 428 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 AVILO75366 819 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 GCATO75600 419 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 KRT37O76014 449 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 DDNO94850 711 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC25A27O95847 323 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 APOEP02649 317 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ATP5BP06576 529 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 SETSIPP0DME0 302 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 RARBP10826 455 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ACADSP16219 412 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TPSB2P20231 275 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ATP6V1C1P21283 382 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 BGNP21810 368 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 RBL1P28749 1068 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 PHKA2P46019 1235 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ATP5OP48047 213 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 CLCN3P51790 818 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 RAP1GDS1P52306 607 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 NDST1P52848 882 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 YWHAGP61981 247 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 MRPS5P82675 430 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 OCRLQ01968 901 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 MTM1Q13496 603 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 COL19A1Q14993 1142 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TAF11Q15544 211 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TPSAB1Q15661 275 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 DBN1Q16643 649 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 C15orf59Q2T9L4 293 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TEX44Q53QW1 395 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF484Q5JVG2 852 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 STXBP5Q5T5C0 1151 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 LGSNQ5TDP6 509 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 CES4AQ5XG92 561 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 RFWD3Q6PCD5 774 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 C1orf228Q6PIY5 440 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 DSTYKQ6XUX3 929 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TIFABQ6ZNK6 161 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF534Q76KX8 674 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 EEPD1Q7L9B9 569 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TMEM110Q86TL2 294 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ZC3H18Q86VM9 953 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 NCAPG2Q86XI2 1143 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 MAP7D3Q8IWC1 876 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TRIM42Q8IWZ5 723 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 KIRREL3Q8IZU9 778 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 UBA3Q8TBC4 463 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 MTBPQ96DY7 904 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 PRR11Q96HE9 360 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 OXNAD1Q96HP4 312 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 SIGLEC10Q96LC7 697 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 SPATA33Q96N06 139 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF670Q9BS34 389 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 C11orf84Q9BUA3 381 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ALG13Q9NP73 1137 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 FBXO6Q9NRD1 293 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 RAB6BQ9NRW1 208 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ETNK2Q9NVF9 386 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TAS2R1Q9NYW7 299 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 GGA3Q9NZ52 723 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 GPRC5DQ9NZD1 345 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 ZC3H7BQ9UGR2 993 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 TSPAN16Q9UKR8 245 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 IKBKGQ9Y6K9 419 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 SCN4AP35499 1836 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 OTOFQ9HC10 1997 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 PLXNA1Q9UIW2 1896 aa5.38□□□□□ -1.55
ATPAF1-212ENST00000542495 A0A0G2JLL6 359 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms