RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 FOXC1Q12948 553 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 KIAA1324Q6UXG2 1013 aaKnown RBP20.81■□□□□ 0.92
DDX11-220ENST00000542244 NUDT18Q6ZVK8 323 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 RSRC2Q7L4I2 434 aaKnown RBP20.81■□□□□ 0.92
DDX11-220ENST00000542244 TRIML1Q8N9V2 468 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 FAXDC2Q96IV6 333 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 HSPA12BQ96MM6 686 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 CAPN10Q9HC96 672 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 ASCC3Q8N3C0 2202 aaKnown RBP20.81■□□□□ 0.92
DDX11-220ENST00000542244 PCDH15Q96QU1 1955 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 CEP192Q8TEP8 1941 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 C1QTNF9BB2RNN3 333 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 XPO1O14980 1071 aaKnown RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 AP5Z1O43299 807 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 STX10O60499 249 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 C1QTNF9P0C862 333 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 PRKCHP24723 683 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 RGS7P49802 495 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 FAM193AP78312 1265 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 FKBP3Q00688 224 aaKnown RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 BYSLQ13895 437 aaKnown RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 TRIP4Q15650 581 aaPredicted RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 PKDCCQ504Y2 493 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 SDE2Q6IQ49 451 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 FMNL3Q8IVF7 1028 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 FAM217AQ8IXS0 508 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 GSDMAQ96QA5 445 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 GTPBP2Q9BX10 602 aaKnown RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 NUSAP1Q9BXS6 441 aaKnown RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 RMND1Q9NWS8 449 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 THAP10Q9P2Z0 257 aaPredicted RBP20.8■□□□□ 0.92
DDX11-220ENST00000542244 MAN1B1Q9UKM7 699 aa20.8■□□□□ 0.92
DDX11-220ENST00000542244 SPAARA0A1B0GVQ0 90 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 GFRA2O00451 464 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 LCP1P13796 627 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 CSRP1P21291 193 aaKnown RBP20.79■□□□□ 0.92
DDX11-220ENST00000542244 ENPP2Q13822 863 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 SGO2Q562F6 1265 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 SPDYCQ5MJ68 293 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 BSPRYQ5W0U4 402 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 TADA2BQ86TJ2 420 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 CACUL1Q86Y37 369 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 LMO3Q8TAP4 145 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 CLEC4CQ8WTT0 213 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 SMARCE1Q969G3 411 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 TSG101Q99816 390 aa20.79■□□□□ 0.92
DDX11-220ENST00000542244 ARMCX3Q9UH62 379 aaPredicted RBP20.79■□□□□ 0.92
DDX11-220ENST00000542244 HLA-EP13747 358 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 HOXD9P28356 352 aaPredicted RBP20.78■□□□□ 0.92
DDX11-220ENST00000542244 FMO5P49326 533 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 BCAT1P54687 386 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 BST2Q10589 180 aaKnown RBP20.78■□□□□ 0.92
DDX11-220ENST00000542244 LMAN2Q12907 356 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 ZNF234Q14588 700 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 PMF1Q6P1K2 205 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 SLC36A4Q6YBV0 504 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 PIP4P1Q86T03 277 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 ARHGEF19Q8IW93 802 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 CPXM2Q8N436 756 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 WFDC5Q8TCV5 224 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 MYEOVQ96EZ4 313 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 ZNF419Q96HQ0 510 aaPredicted RBP20.78■□□□□ 0.92
DDX11-220ENST00000542244 CDK5RAP1Q96SZ6 601 aaKnown RBP20.78■□□□□ 0.92
DDX11-220ENST00000542244 DCLK3Q9C098 648 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 LRRC4Q9HBW1 653 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 ELOVL2Q9NXB9 296 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 RALYQ9UKM9 306 aaKnown RBP20.78■□□□□ 0.92
DDX11-220ENST00000542244 SLC6A14Q9UN76 642 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 ZNF510Q9Y2H8 683 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 CEP295Q9C0D2 2601 aa20.78■□□□□ 0.92
DDX11-220ENST00000542244 GOLGA6L7A0A1B0GV03 622 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 SERPINF2P08697 491 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 VDRP11473 427 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 CEACAM1P13688 526 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 BRD2P25440 801 aaKnown RBP20.77■□□□□ 0.92
DDX11-220ENST00000542244 CHKAP35790 457 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 COPAP53621 1224 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 SEMA3BQ13214 749 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 DUOXA1Q1HG43 343 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 TMEM270Q6UE05 265 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 ARHGAP18Q8N392 663 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 TTC39CQ8N584 583 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 ZNF366Q8N895 744 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 DDI1Q8WTU0 396 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 TMEM121BQ9BXQ6 578 aaPredicted RBP20.77■□□□□ 0.92
DDX11-220ENST00000542244 STRIP2Q9ULQ0 834 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 SLCO1B1Q9Y6L6 691 aa20.77■□□□□ 0.92
DDX11-220ENST00000542244 PI4KAP42356 2102 aa20.77■□□□□ 0.91
DDX11-220ENST00000542244 PPP1R3GB7ZBB8 358 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 ZNF217O75362 1048 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 HLA-FP30511 346 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 DAOAP59103 153 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 LRRC63Q05C16 580 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 KLHL10Q6JEL2 608 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 TTI2Q6NXR4 508 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 RRAGAQ7L523 313 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 ANKS1BQ7Z6G8 1248 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 MINDY1Q8N5J2 469 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 CYB5D2Q8WUJ1 264 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 PLD4Q96BZ4 506 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms