RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 COPS2P61201 443 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 SYPL2Q5VXT5 272 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 SCYL2Q6P3W7 929 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 SPOCD1Q6ZMY3 1216 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 GPR149Q86SP6 731 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 ASAH2Q9NR71 780 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 CD207Q9UJ71 328 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 C5orf42Q9H799 3197 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 C3orf70A6NLC5 250 aaPredicted RBP28.9■■■□□ 2.22
CCM2-218ENST00000541586 LTFP02788 710 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 RHOP08100 348 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 MYL4P12829 197 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 YWHAQP27348 245 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 HSPH1Q92598 858 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 NT5C3BQ969T7 300 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 ZNF334Q9HCZ1 680 aaPredicted RBP28.9■■■□□ 2.22
CCM2-218ENST00000541586 CALCOCO1Q9P1Z2 691 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 NAALADL1Q9UQQ1 740 aa28.9■■■□□ 2.22
CCM2-218ENST00000541586 RTN3O95197 1032 aaPredicted RBP28.89■■■□□ 2.22
CCM2-218ENST00000541586 SULT1E1P49888 294 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 ATXN1P54253 815 aaKnown RBP28.89■■■□□ 2.22
CCM2-218ENST00000541586 SLC7A5Q01650 507 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 KLF1Q13351 362 aaPredicted RBP28.89■■■□□ 2.22
CCM2-218ENST00000541586 ATAT1Q5SQI0 421 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 STRADAQ7RTN6 431 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 CEP295NLQ96MC4 621 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 NPY6RQ99463 290 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 PRDM6Q9NQX0 595 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 DMGDHQ9UI17 866 aaKnown RBP28.89■■■□□ 2.22
CCM2-218ENST00000541586 STAP1Q9ULZ2 295 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 DOCK6Q96HP0 2047 aa28.89■■■□□ 2.22
CCM2-218ENST00000541586 RAD51CO43502 376 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 KDELR1P24390 212 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 PTPN7P35236 360 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 CDKN2BP42772 138 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 PITX1P78337 314 aaPredicted RBP28.89■■■□□ 2.21
CCM2-218ENST00000541586 TAF10Q12962 218 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 PPP2R5EQ16537 467 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 PABPC1LQ4VXU2 614 aaKnown RBP28.89■■■□□ 2.21
CCM2-218ENST00000541586 TFDP3Q5H9I0 405 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 OTUD1Q5VV17 481 aaPredicted RBP28.89■■■□□ 2.21
CCM2-218ENST00000541586 PDZD4Q76G19 769 aaPredicted RBP28.89■■■□□ 2.21
CCM2-218ENST00000541586 MAIP1Q8WWC4 291 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 FBXO32Q969P5 355 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 FBXO44Q9H4M3 255 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 SLITRK6Q9H5Y7 841 aa28.89■■■□□ 2.21
CCM2-218ENST00000541586 CAPN9O14815 690 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 PHF2O75151 1096 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 KRT10P13645 584 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 BOLA3Q53S33 107 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 KCTD6Q8NC69 237 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 SMRP1Q8NCR6 262 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.88■■■□□ 2.21
CCM2-218ENST00000541586 RAB21Q9UL25 225 aa28.88■■■□□ 2.21
CCM2-218ENST00000541586 hCG_1818297A0A087WSY0 165 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 H2AFXP16104 143 aaPredicted RBP28.87■■■□□ 2.21
CCM2-218ENST00000541586 GJA1P17302 382 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 GABRR2P28476 465 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 CYP1B1Q16678 543 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 KAZNQ674X7 775 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 BNIPLQ7Z465 357 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 TEKT4Q8WW24 435 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 UXTQ9UBK9 157 aaPredicted RBP28.87■■■□□ 2.21
CCM2-218ENST00000541586 AMACRQ9UHK6 382 aa28.87■■■□□ 2.21
CCM2-218ENST00000541586 ENDOD1O94919 500 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 CD48P09326 243 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 NCAM1P13591 858 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 VSNL1P62760 191 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 ADCY2Q08462 1091 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 BSPRYQ5W0U4 402 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 WDR93Q6P2C0 686 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 FBXO38Q6PIJ6 1188 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 TMC8Q8IU68 726 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 MAGOHBQ96A72 148 aaKnown RBP28.86■■■□□ 2.21
CCM2-218ENST00000541586 TCEAL4Q96EI5 215 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 HINFPQ9BQA5 517 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 LRRC3Q9BY71 257 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 STIM2Q9P246 746 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 CHRNA3P32297 505 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 TAZQ16635 292 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 EDEM1Q92611 657 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 MYRFLQ96LU7 910 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 RIPOR3Q96MK2 946 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 SNRNP25Q9BV90 132 aaKnown RBP28.86■■■□□ 2.21
CCM2-218ENST00000541586 TTLL2Q9BWV7 592 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 ATXN3LQ9H3M9 355 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 IL37Q9NZH6 218 aa28.86■■■□□ 2.21
CCM2-218ENST00000541586 A0A1W2PRU2 124 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 M0QYT0 321 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 MDM4O15151 490 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 TUBBP07437 444 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 POU2F2P09086 479 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 CCR2P41597 374 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 ARSEP51690 589 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 GAREM2Q75VX8 874 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 C12orf50Q8NA57 414 aaPredicted RBP28.85■■■□□ 2.21
CCM2-218ENST00000541586 CCDC26Q8TAB7 109 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 C1orf54Q8WWF1 131 aa28.85■■■□□ 2.21
CCM2-218ENST00000541586 TRMT2BQ96GJ1 504 aaKnown RBP28.85■■■□□ 2.21
CCM2-218ENST00000541586 GPATCH2LQ9NWQ4 482 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms