RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MYO10Q9HD67 2058 aa9.74□□□□□ -0.85
DDX55-208ENST00000541259 DOCK4Q8N1I0 1966 aa9.74□□□□□ -0.85
DDX55-208ENST00000541259 GOLGA6L9A6NEM1 432 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 M0QYT0 321 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 NCK2O43639 380 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 LRCH4O75427 683 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 ENDOD1O94919 500 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 FTCDO95954 541 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 IGLV3-25P01717 112 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 HMBSP08397 361 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 TNNT1P13805 278 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 FOSL2P15408 326 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 HOXB8P17481 243 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 CEBPBP17676 345 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 CDC25CP30307 473 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 HDAC4P56524 1084 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 TAS2R40P59535 323 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 NME3Q13232 169 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 EIF4EBP2Q13542 120 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 CBX2Q14781 532 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 ZNF569Q5MCW4 686 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 GPR158Q5T848 1215 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 CC2D1AQ6P1N0 951 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 MSANTD2Q6P1R3 559 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 DAAM2Q86T65 1068 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 SLC35F6Q8N357 371 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 ZNF276Q8N554 614 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 NIPA2Q8N8Q9 360 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 ARL14EPQ8N8R7 260 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 MRPS31Q92665 395 aaKnown RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 WBP2Q969T9 261 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 GCNAQ96QF7 691 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 PEBP4Q96S96 227 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 MAGEB5Q9BZ81 275 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 ADAM7Q9H2U9 754 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 SMOC2Q9H3U7 446 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 FAM204AQ9H8W3 233 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 WDR6Q9NNW5 1121 aaKnown RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 TMPRSS4Q9NRS4 437 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 GKN1Q9NS71 199 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 PIGVQ9NUD9 493 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 DDIT4Q9NX09 232 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 PCSK1NQ9UHG2 260 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 RASAL2Q9UJF2 1139 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 STAP1Q9ULZ2 295 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 PACSIN2Q9UNF0 486 aaPredicted RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 MRPS23Q9Y3D9 190 aaKnown RBP9.73□□□□□ -0.85
DDX55-208ENST00000541259 NUP205Q92621 2012 aa9.73□□□□□ -0.85
DDX55-208ENST00000541259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 SLC12A8A0AV02 714 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 H3BQ06 376 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 I6L893 689 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 FANCGO15287 622 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 IRAK2O43187 625 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 KIF5CO60282 957 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 FGF19O95750 216 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 HDCP19113 662 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 FSHRP23945 695 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 IL1R2P27930 398 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 MIPP30301 263 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 ATP5C1P36542 298 aaKnown RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 SSR1P43307 286 aaKnown RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 TUBP50607 506 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 GNG11P61952 73 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 ZXDBP98169 803 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 DEUP1Q05D60 604 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 ITIH3Q06033 890 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 ATP13A4Q4VNC1 1196 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 ZC3H12AQ5D1E8 599 aaKnown RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 C11orf63Q6NUN7 778 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 SCYL2Q6P3W7 929 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 CYP4V2Q6ZWL3 525 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 STRADAQ7RTN6 431 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 NT5DC3Q86UY8 548 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 MIB1Q86YT6 1006 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 LEMD2Q8NC56 503 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 PGAP3Q96FM1 320 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 FCRL2Q96LA5 508 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 WDR24Q96S15 920 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 TRIM62Q9BVG3 475 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 KLF16Q9BXK1 252 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 SMG9Q9H0W8 520 aaKnown RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 ZWILCHQ9H900 591 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 ANLNQ9NQW6 1124 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 OLA1Q9NTK5 396 aaKnown RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 SMPD4Q9NXE4 827 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 RRN3Q9NYV6 651 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.72□□□□□ -0.85
DDX55-208ENST00000541259 MARCH2Q9P0N8 246 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 PRUNE2Q8WUY3 3088 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 KIF26AQ9ULI4 1882 aaPredicted RBP9.72□□□□□ -0.85
DDX55-208ENST00000541259 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
DDX55-208ENST00000541259 ZNF197O14709 1029 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 SPOPO43791 374 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms