RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 NUGGCQ68CJ6 796 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 OLFML1Q6UWY5 402 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 ZDHHC17Q8IUH5 632 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 DENND1CQ8IV53 801 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 TERB1Q8NA31 727 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 TMEM35BQ8NCS4 154 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
LTBR-208ENST00000541005 USP33Q8TEY7 942 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 AZIN2Q96A70 460 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 ACDQ96AP0 544 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 FAM149B1Q96BN6 582 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 P2RY11Q96G91 374 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 PIWIL1Q96J94 861 aaKnown RBP13.67□□□□□ -0.22
LTBR-208ENST00000541005 SERPINB11Q96P15 392 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 SLC2A13Q96QE2 648 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
LTBR-208ENST00000541005 POPDC2Q9HBU9 364 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
LTBR-208ENST00000541005 ARHGEF4Q9NR80 690 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
LTBR-208ENST00000541005 NUP205Q92621 2012 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 A0A1B0GTH6 734 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 NEDD8-MDP1E9PL57 170 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 HSF2BPO75031 334 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 SCNN1AP37088 669 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 STAT1P42224 750 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 TNFRSF4P43489 277 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 KIR2DL1P43626 348 aaPredicted RBP13.66□□□□□ -0.22
LTBR-208ENST00000541005 GABRB2P47870 512 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 NOMO3P69849 1222 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 MRPS21P82921 87 aaKnown RBP13.66□□□□□ -0.22
LTBR-208ENST00000541005 KDSRQ06136 332 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 FYB2Q5VWT5 728 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 TSSK4Q6SA08 328 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 TPGS1Q6ZTW0 290 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 SYT13Q7L8C5 426 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 SLC26A9Q7LBE3 791 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 TAC4Q86UU9 113 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
LTBR-208ENST00000541005 RPLP0P6Q8NHW5 317 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 KCNV2Q8TDN2 545 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
LTBR-208ENST00000541005 XPO6Q96QU8 1125 aaKnown RBP13.66□□□□□ -0.22
LTBR-208ENST00000541005 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 CBX8Q9HC52 389 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 FBXO10Q9UK96 956 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 NAALADL1Q9UQQ1 740 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 TLR6Q9Y2C9 796 aa13.66□□□□□ -0.22
LTBR-208ENST00000541005 CCDC163A0A0D9SF12 145 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 A0A1W2PQC6 194 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 IRAK2O43187 625 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 DAB1O75553 588 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 GFPT2O94808 682 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 CISD3P0C7P0 127 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 MRE11P49959 708 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 TBX4P57082 545 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 CDR2Q01850 454 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 EIF4EBP2Q13542 120 aaPredicted RBP13.65□□□□□ -0.22
LTBR-208ENST00000541005 ADGRF1Q5T601 910 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 SYPL2Q5VXT5 272 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 RNF43Q68DV7 783 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 GRAMD4Q6IC98 578 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 FAM183BPQ6ZVS7 135 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 SFTPA1Q8IWL2 248 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 UNC45BQ8IWX7 931 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 ABCA7Q8IZY2 2146 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 SLC20A1Q8WUM9 679 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 NKD2Q969F2 451 aaPredicted RBP13.65□□□□□ -0.22
LTBR-208ENST00000541005 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
LTBR-208ENST00000541005 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.22
LTBR-208ENST00000541005 MYO6Q9UM54 1294 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 SLC27A6Q9Y2P4 619 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 STARD13Q9Y3M8 1113 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 R4GN57 208 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 THADAQ6YHU6 1953 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 MYO15AQ9UKN7 3530 aa13.65□□□□□ -0.22
LTBR-208ENST00000541005 ZNF292O60281 2723 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 CHD5Q8TDI0 1954 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 PRR23AA6NEV1 266 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 CAPN9O14815 690 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 TEX33O43247 280 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 TRUB2O95900 331 aaKnown RBP13.64□□□□□ -0.23
LTBR-208ENST00000541005 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
LTBR-208ENST00000541005 CYBBP04839 570 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 MMEP08473 750 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 CHRNB2P17787 502 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 FMO1Q01740 532 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 TAF5Q15542 800 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 FAM133BQ5BKY9 247 aaKnown RBP13.64□□□□□ -0.23
LTBR-208ENST00000541005 TAF3Q5VWG9 929 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms