RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 IFNAR2P48551 515 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 ZNF143P52747 638 aaPredicted RBP18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 GALCP54803 685 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 PIGHQ14442 188 aaPredicted RBP18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 PPP2R5DQ14738 602 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 ARL13BQ3SXY8 428 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 PREPLQ4J6C6 727 aaPredicted RBP18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 SLC44A3Q8N4M1 653 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 ATP6V0D2Q8N8Y2 350 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 ZNF557Q8N988 423 aaPredicted RBP18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 NDRG1Q92597 394 aaKnown RBP18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 RNF34Q969K3 372 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 SLC22A12Q96S37 553 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 NPY6RQ99463 290 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 CNPY3Q9BT09 278 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 BRD9Q9H8M2 597 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 SLC2A4RGQ9NR83 387 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 DDIT4Q9NX09 232 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 CFAP97Q9P2B7 532 aa18.24■□□□□ 0.51
CLSTN3-210ENST00000540931 TCRBV5S1A1TA0A578 114 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 M0QYT0 321 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 MYO1FO00160 1098 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 IRAK2O43187 625 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 ENDOD1O94919 500 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 PRAMEF12O95522 483 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 TBX18O95935 607 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 IGLV3-25P01717 112 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 VIPR2P41587 438 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 MAGEA1P43355 309 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 DEUP1Q05D60 604 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 TCEAL1Q15170 157 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 PPP1R15BQ5SWA1 713 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 SYPL2Q5VXT5 272 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 VITQ6UXI7 678 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 CSGALNACT1Q8TDX6 532 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 PDLIM2Q96JY6 352 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 ZFRQ96KR1 1074 aaKnown RBP18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 BTN2A3PQ96KV6 586 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 DUS2Q9NX74 493 aaKnown RBP18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 SMPD4Q9NXE4 827 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 IP6K2Q9UHH9 426 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 WDFY4Q6ZS81 3184 aa18.23■□□□□ 0.51
CLSTN3-210ENST00000540931 TYW5A2RUC4 315 aaKnown RBP18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 TMEM191CA6NGB0 347 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 GRAP2O75791 330 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 STC2O76061 302 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 IGLV3-27P01718 113 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 RFC1P35251 1148 aaPredicted RBP18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 ARHGAP25P42331 645 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 PGFP49763 221 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 SULT1E1P49888 294 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 TAF5Q15542 800 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 IFI16Q16666 785 aaKnown RBP18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 CPXM2Q8N436 756 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 CPA6Q8N4T0 437 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 RXFP2Q8WXD0 754 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 MCEEQ96PE7 176 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 KXD1Q9BQD3 176 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 THAP2Q9H0W7 228 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 WDCPQ9H6R7 721 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 CTTNBP2NLQ9P2B4 639 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 SFMBT1Q9UHJ3 866 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 DUSP12Q9UNI6 340 aa18.22■□□□□ 0.51
CLSTN3-210ENST00000540931 HELZP42694 1942 aaKnown RBP18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 TRIOO75962 3097 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 A0A0A6YYK5 440 aaPredicted RBP18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 ADH1CP00326 375 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 CYBBP04839 570 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 GDI1P31150 447 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 FLT3P36888 993 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 EIF4EBP2Q13542 120 aaPredicted RBP18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 C2CD6Q53TS8 623 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 TAC4Q86UU9 113 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 RFFLQ8WZ73 363 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 CENPIQ92674 756 aaPredicted RBP18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 SLC39A13Q96H72 371 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 SHDQ96IW2 340 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 PIWIL1Q96J94 861 aaKnown RBP18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 FAM83CQ9BQN1 747 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 RETREG1Q9H6L5 497 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 C8orf33Q9H7E9 229 aaPredicted RBP18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 GKN1Q9NS71 199 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 SPTLC3Q9NUV7 552 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 MYO1AQ9UBC5 1043 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 WNT16Q9UBV4 365 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 STOML2Q9UJZ1 356 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 NUDT5Q9UKK9 219 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 CCL26Q9Y258 94 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 PCDHA13Q9Y5I0 950 aa18.21■□□□□ 0.51
CLSTN3-210ENST00000540931 TECTAO75443 2155 aa18.2■□□□□ 0.5
CLSTN3-210ENST00000540931 SOWAHDA6NJG2 315 aa18.2■□□□□ 0.5
CLSTN3-210ENST00000540931 NRG2O14511 850 aaPredicted RBP18.2■□□□□ 0.5
CLSTN3-210ENST00000540931 CORO1AP31146 461 aaKnown RBP18.2■□□□□ 0.5
CLSTN3-210ENST00000540931 CXCR3P49682 368 aa18.2■□□□□ 0.5
CLSTN3-210ENST00000540931 ZNF135P52742 658 aaPredicted RBP18.2■□□□□ 0.5
CLSTN3-210ENST00000540931 ADGRF1Q5T601 910 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms