RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PRG3	Q9Y2Y8	225 aa	Predicted RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SF3B1	O75533	1304 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ABLIM1	O14639	778 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CTGF	P29279	349 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SCNN1B	P51168	640 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NRL	P54845	237 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GPX6	P59796	221 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCNG2	Q16589	344 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NFE2	Q16621	373 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CLEC16A	Q2KHT3	1053 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MSS51	Q4VC12	460 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TIGD5	Q53EQ6	642 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LRRC23	Q53EV4	343 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KRT39	Q6A163	491 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PAF1	Q8N7H5	531 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMC2	Q8TDI7	906 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZFAND2B	Q8WV99	257 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DDX1	Q92499	740 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FAM111A	Q96PZ2	611 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NDN	Q99608	321 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	THTPA	Q9BU02	230 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NMUR2	Q9GZQ4	415 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TLE6	Q9H808	572 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PDLIM7	Q9NR12	457 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCDC195	A0A1B0GUA6	201 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783		E5RJQ4	531 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SGK1	O00141	431 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FCHO1	O14526	889 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	P4HA2	O15460	535 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	OPHN1	O60890	802 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	B3GAT3	O94766	335 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PYGB	P11216	843 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CSF2RA	P15509	400 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	POLR2B	P30876	1174 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ATIC	P31939	592 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GTF2H1	P32780	548 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MAN1A1	P33908	653 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARPP19	P56211	112 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KLF1	Q13351	362 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TCEAL1	Q15170	157 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PDCD2	Q16342	344 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FAM187B	Q17R55	369 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LRRC26	Q2I0M4	334 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	AAK1	Q2M2I8	961 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PRPF38B	Q5VTL8	546 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ANKRD22	Q5VYY1	191 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SPOPL	Q6IQ16	392 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	C3orf62	Q6ZUJ4	267 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DPH6	Q7L8W6	267 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CMTR2	Q8IYT2	770 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KATNBL1	Q9H079	304 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KCNK13	Q9HB14	408 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SAR1A	Q9NR31	198 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LMCD1	Q9NZU5	365 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	STX18	Q9P2W9	335 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LNPEP	Q9UIQ6	1025 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DNALI1	O14645	258 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZWINT	O95229	277 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ACR	P10323	421 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GTF2B	Q00403	316 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TUSC3	Q13454	348 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TARBP2	Q15633	366 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZRSR2	Q15696	482 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	BBS9	Q3SYG4	887 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TXNRD3NB	Q6F5E7	133 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MFSD7	Q6UXD7	560 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	EFCAB3	Q8N7B9	438 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	OR6B3	Q8NGW1	331 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DIS3L	Q8TF46	1054 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMEM175	Q9BSA9	504 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MECR	Q9BV79	373 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LMAN2L	Q9H0V9	348 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MRPL17	Q9NRX2	175 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NXF1	Q9UBU9	619 aa	Known RBP	5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ITGA11	Q9UKX5	1188 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	UTRN	P46939	3433 aa		5.87	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MEI4	A8MW99	385 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RNASEH1	O60930	286 aa	Known RBP	5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	XYLB	O75191	536 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PROSC	O94903	275 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	OR6B1	O95007	311 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ADH1A	P07327	375 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NSF	P46459	744 aa	Known RBP	5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF200	P98182	395 aa	Predicted RBP	5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CENPC	Q03188	943 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RASA2	Q15283	850 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SNRNP35	Q16560	246 aa	Known RBP	5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NFIL3	Q16649	462 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FNBP1L	Q5T0N5	605 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CES5A	Q6NT32	575 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RIPOR1	Q6ZS17	1223 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCDC149	Q6ZUS6	474 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TREML1	Q86YW5	311 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	BBOF1	Q8ND07	529 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PYROXD1	Q8WU10	500 aa		5.86	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NMD3	Q96D46	503 aa	Known RBP	5.86	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms